RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 NUMBLQ9Y6R0 609 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 METP08581 1390 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 HFM1A2PYH4 1435 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 COL16A1Q07092 1604 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-212ENST00000529046 PHLPP1O60346 1717 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-212ENST00000529046 PATE3B3GLJ2 98 aa6.38□□□□□ -1.39
CSDE1-212ENST00000529046 C1QTNF3-AMACRE9PGA6 284 aa6.38□□□□□ -1.39
CSDE1-212ENST00000529046 FZD9O00144 591 aa6.38□□□□□ -1.39
CSDE1-212ENST00000529046 KRT85P78386 507 aa6.38□□□□□ -1.39
CSDE1-212ENST00000529046 ADCY2Q08462 1091 aa6.38□□□□□ -1.39
CSDE1-212ENST00000529046 SYDE2Q5VT97 1194 aa6.38□□□□□ -1.39
CSDE1-212ENST00000529046 TRIM68Q6AZZ1 485 aa6.38□□□□□ -1.39
CSDE1-212ENST00000529046 TIGD7Q6NT04 549 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-212ENST00000529046 PPP1R14CQ8TAE6 165 aa6.38□□□□□ -1.39
CSDE1-212ENST00000529046 ERCC4Q92889 916 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-212ENST00000529046 NEIL1Q96FI4 390 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-212ENST00000529046 AHCYL2Q96HN2 611 aaKnown RBP6.38□□□□□ -1.39
CSDE1-212ENST00000529046 GNRHR2Q96P88 292 aa6.38□□□□□ -1.39
CSDE1-212ENST00000529046 KCMF1Q9P0J7 381 aa6.38□□□□□ -1.39
CSDE1-212ENST00000529046 NOC2LQ9Y3T9 749 aaKnown RBP6.38□□□□□ -1.39
CSDE1-212ENST00000529046 TCAF1Q9Y4C2 921 aa6.38□□□□□ -1.39
CSDE1-212ENST00000529046 NRXN3Q9Y4C0 1643 aa6.38□□□□□ -1.39
CSDE1-212ENST00000529046 SPHKAPQ2M3C7 1700 aa6.38□□□□□ -1.39
CSDE1-212ENST00000529046 XRN1Q8IZH2 1706 aaKnown RBP6.38□□□□□ -1.39
CSDE1-212ENST00000529046 NEXMIFQ5QGS0 1516 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 MST1RQ04912 1400 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 PTCH1Q13635 1447 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 ADGRL3Q9HAR2 1447 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 PRSS38A1L453 326 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 GABRDO14764 452 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 OPHN1O60890 802 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 PDGFRBP09619 1106 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 GPR3P46089 330 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 RAC3P60763 192 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 KLF1Q13351 362 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-212ENST00000529046 NOLC1Q14978 699 aaKnown RBP eCLIP6.37□□□□□ -1.39
CSDE1-212ENST00000529046 ZNF585AQ6P3V2 769 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 GIMAP8Q8ND71 665 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-212ENST00000529046 OR5AN1Q8NGI8 311 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 RSAD2Q8WXG1 361 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 CDK5RAP1Q96SZ6 601 aaKnown RBP6.37□□□□□ -1.39
CSDE1-212ENST00000529046 KLC2Q9H0B6 622 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 CDC42EP3Q9UKI2 254 aa6.37□□□□□ -1.39
CSDE1-212ENST00000529046 SHPRHQ149N8 1683 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 CDK12Q9NYV4 1490 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-212ENST00000529046 A0A0G2JNJ9 132 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 KATNA1O75449 491 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 ENPP1P22413 925 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 SELENOPP49908 381 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 RNF151Q2KHN1 245 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 CCDC178Q5BJE1 867 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 PITRM1Q5JRX3 1037 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 PRAMEF9Q5VWM5 478 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 GRAMD4Q6IC98 578 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 KCNK18Q7Z418 384 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 TAX1BP1Q86VP1 789 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 CMIPQ8IY22 773 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 NKD2Q969F2 451 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-212ENST00000529046 MTG2Q9H4K7 406 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 C14orf119Q9NWQ9 140 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 Q9UFV3 132 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 TSC22D4Q9Y3Q8 395 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 NR2E1Q9Y466 385 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 CLTCL1P53675 1640 aa6.36□□□□□ -1.39
CSDE1-212ENST00000529046 ASXL1Q8IXJ9 1541 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 MYPNQ86TC9 1320 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 ZNF623O75123 536 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 RAB11FIP3O75154 756 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 GPR15P49685 360 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 TCTN3Q6NUS6 607 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 LARP4Q71RC2 724 aaKnown RBP eCLIP6.35□□□□□ -1.398e-15■□□□□ 10
CSDE1-212ENST00000529046 PALM2Q8IXS6 379 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 Q8TCH9 128 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 RPGRQ92834 1020 aaKnown RBP6.35□□□□□ -1.39
CSDE1-212ENST00000529046 WWC2-AS2Q96NR7 200 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 KIAA1683Q9H0B3 1180 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 PRDM12Q9H4Q4 367 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 TRHDEQ9UKU6 1024 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 OAZ3Q9UMX2 235 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 SPEF1Q9Y4P9 236 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 LRP6O75581 1613 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 LAMC1P11047 1609 aa6.35□□□□□ -1.39
CSDE1-212ENST00000529046 A0A0A6YYK5 440 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-212ENST00000529046 MUSKO15146 869 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 MATN3O15232 486 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 ARHGAP6O43182 974 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 FOXS1O43638 330 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 SEC24DO94855 1032 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-212ENST00000529046 TNFRSF1AP19438 455 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 MEOX1P50221 254 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 ANTXR2P58335 489 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 MAP3K12Q12852 859 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 CDSNQ15517 529 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 HS1BP3Q53T59 392 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 AGBL4Q5VU57 503 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 RTKN2Q8IZC4 609 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 SOX7Q9BT81 388 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 SLC13A1Q9BZW2 595 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 CCDC8Q9H0W5 538 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms