RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 TRIM43Q96BQ3 446 aaPredicted RBP8.65□□□□□ -1.02
SSBP3-211ENST00000528787 FNBP1Q96RU3 617 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 RPS6KC1Q96S38 1066 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 FIZ1Q96SL8 496 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 PPP1R16BQ96T49 567 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 ADAM2Q99965 735 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 WNT8AQ9H1J5 351 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 ASB7Q9H672 318 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 FAM105AQ9NUU6 356 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 TMEM161AQ9NX61 479 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 TMEM63CQ9P1W3 806 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 GIT1Q9Y2X7 761 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 DERAQ9Y315 318 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 RWDD3Q9Y3V2 267 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 LTBP2Q14767 1821 aa8.65□□□□□ -1.02
SSBP3-211ENST00000528787 ADGRA3Q8IWK6 1321 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 DNAH12Q6ZR08 3092 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 A0A0B4J269 797 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 BIN1O00499 593 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 IKBKBO14920 756 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 NBNO60934 754 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 N4BP1O75113 896 aaKnown RBP8.64□□□□□ -1.03
SSBP3-211ENST00000528787 NR3C1P04150 777 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 TPM3P06753 285 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 CSF2RAP15509 400 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 PROZP22891 400 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 NR2F2P24468 414 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 BMP8BP34820 402 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 GRM5P41594 1212 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 TYRO3Q06418 890 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 ADAM9Q13443 819 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 ZC2HC1CQ53FD0 456 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-211ENST00000528787 TRAF7Q6Q0C0 670 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 FILIP1Q7Z7B0 1213 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 CSGALNACT2Q8N6G5 542 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 CCDC150Q8NCX0 1101 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 ENOX1Q8TC92 643 aaKnown RBP8.64□□□□□ -1.03
SSBP3-211ENST00000528787 TMEM40Q8WWA1 233 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 NELFBQ8WX92 580 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 HERVK_113Q902F9 699 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 BADQ92934 168 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 WNT8BQ93098 351 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 ZBTB10Q96DT7 871 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 SCLYQ96I15 445 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 FAM193BQ96PV7 902 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-211ENST00000528787 KIFC3Q9BVG8 833 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 TARS2Q9BW92 718 aaKnown RBP8.64□□□□□ -1.03
SSBP3-211ENST00000528787 TSPY26PQ9H489 355 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 THAP9Q9H5L6 903 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 PDZD7Q9H5P4 517 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 RPF1Q9H9Y2 349 aaKnown RBP8.64□□□□□ -1.03
SSBP3-211ENST00000528787 AAASQ9NRG9 546 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 AGPAT3Q9NRZ7 376 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 PCDHB2Q9Y5E7 798 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 SLC4A7Q9Y6M7 1214 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 TTC3P53804 2025 aa8.64□□□□□ -1.03
SSBP3-211ENST00000528787 SCN5AQ14524 2016 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 SYCE3A1L190 88 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 ZBBXA8MT70 800 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 NPTXRO95502 500 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 ATF7P17544 494 aaPredicted RBP8.63□□□□□ -1.03
SSBP3-211ENST00000528787 TRIM21P19474 475 aaKnown RBP8.63□□□□□ -1.03
SSBP3-211ENST00000528787 EEF1GP26641 437 aaKnown RBP8.63□□□□□ -1.03
SSBP3-211ENST00000528787 CASP1P29466 404 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 HOXA11P31270 313 aaPredicted RBP8.63□□□□□ -1.03
SSBP3-211ENST00000528787 ZNF165P49910 485 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 ZNF445P59923 1031 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 FAM189BP81408 668 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 MYL5Q02045 173 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 DSC3Q14574 896 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 BMS1Q14692 1282 aaKnown RBP8.63□□□□□ -1.03
SSBP3-211ENST00000528787 AMHR2Q16671 573 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 SPATA1Q5VX52 437 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 SMYD5Q6GMV2 418 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 KLHL10Q6JEL2 608 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 LRSAM1Q6UWE0 723 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 FRMD5Q7Z6J6 570 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 MRPL10Q7Z7H8 261 aaKnown RBP8.63□□□□□ -1.03
SSBP3-211ENST00000528787 NELFCDQ8IXH7 590 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 PPP1R13LQ8WUF5 828 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 FAM81BQ96LP2 452 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 UROC1Q96N76 676 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 ZBED2Q9BTP6 218 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 UBE2OQ9C0C9 1292 aaKnown RBP8.63□□□□□ -1.03
SSBP3-211ENST00000528787 KCTD10Q9H3F6 313 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 MINDY3Q9H8M7 445 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 AGO3Q9H9G7 860 aaKnown RBP8.63□□□□□ -1.03
SSBP3-211ENST00000528787 CDHR5Q9HBB8 845 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 PTPRHQ9HD43 1115 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 HSPBP1Q9NZL4 362 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 CTNND2Q9UQB3 1225 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 GDAQ9Y2T3 454 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 INSL6Q9Y581 213 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 BRCA2P51587 3418 aa8.63□□□□□ -1.03
SSBP3-211ENST00000528787 RALGAPA2Q2PPJ7 1873 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 PPP1R3GB7ZBB8 358 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 C9IYK1 514 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 ENPP3O14638 875 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 CDK11BP21127 795 aaKnown RBP8.62□□□□□ -1.03
SSBP3-211ENST00000528787 GTF2H1P32780 548 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms