RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 MTIF3Q9H2K0 278 aaKnown RBP6.8□□□□□ -1.32
MACF1-228ENST00000528611 THAP9Q9H5L6 903 aa6.8□□□□□ -1.32
MACF1-228ENST00000528611 ASB7Q9H672 318 aa6.8□□□□□ -1.32
MACF1-228ENST00000528611 ERVK-5Q9HDB9 667 aa6.8□□□□□ -1.32
MACF1-228ENST00000528611 TOPORSQ9NS56 1045 aaPredicted RBP6.8□□□□□ -1.32
MACF1-228ENST00000528611 DMAC2Q9NW81 257 aa6.8□□□□□ -1.32
MACF1-228ENST00000528611 KANSL3Q9P2N6 904 aa6.8□□□□□ -1.32
MACF1-228ENST00000528611 PADI3Q9ULW8 664 aa6.8□□□□□ -1.32
MACF1-228ENST00000528611 DERAQ9Y315 318 aa6.8□□□□□ -1.32
MACF1-228ENST00000528611 SIP14410 1827 aa6.8□□□□□ -1.32
MACF1-228ENST00000528611 ADGRA3Q8IWK6 1321 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 TANC1Q9C0D5 1861 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 BRCA2P51587 3418 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 LRRC10BA6NIK2 292 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 CCDC85CA6NKD9 419 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 OGTO15294 1046 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 PMM2O15305 246 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 TGFB1I1O43294 461 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 XPOTO43592 962 aaKnown RBP6.79□□□□□ -1.32
MACF1-228ENST00000528611 STX10O60499 249 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 TSPAN1O60635 241 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 IL18RAPO95256 599 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 CLTAP09496 248 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 STAG3L1P0CL83 205 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 ARF4P18085 180 aaPredicted RBP6.79□□□□□ -1.32
MACF1-228ENST00000528611 BMP6P22004 513 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 EEF1GP26641 437 aaKnown RBP6.79□□□□□ -1.32
MACF1-228ENST00000528611 NMT1P30419 496 aaKnown RBP6.79□□□□□ -1.32
MACF1-228ENST00000528611 HOXA11P31270 313 aaPredicted RBP6.79□□□□□ -1.32
MACF1-228ENST00000528611 PSMC2P35998 433 aaKnown RBP6.79□□□□□ -1.32
MACF1-228ENST00000528611 GRM5P41594 1212 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 ZNF165P49910 485 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 DSC3Q14574 896 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 NOLC1Q14978 699 aaKnown RBP eCLIP6.79□□□□□ -1.32
MACF1-228ENST00000528611 SPATA1Q5VX52 437 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 INTS8Q75QN2 995 aaKnown RBP6.79□□□□□ -1.32
MACF1-228ENST00000528611 TAS1R3Q7RTX0 852 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 FRMD5Q7Z6J6 570 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 FAM228AQ86W67 206 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 KSR1Q8IVT5 923 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 XXYLT1Q8NBI6 393 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 ANKRD20A12PQ8NF67 263 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 FAM200AQ8TCP9 573 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 BICD1Q96G01 975 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 WNT8AQ9H1J5 351 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 FAM124BQ9H5Z6 455 aaPredicted RBP6.79□□□□□ -1.32
MACF1-228ENST00000528611 IL23AQ9NPF7 189 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 AGPAT3Q9NRZ7 376 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 STK39Q9UEW8 545 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 ST3GAL5Q9UNP4 418 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 FRMD4BQ9Y2L6 1034 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 GIT1Q9Y2X7 761 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 NOC2LQ9Y3T9 749 aaKnown RBP6.79□□□□□ -1.32
MACF1-228ENST00000528611 DAAM1Q9Y4D1 1078 aa6.79□□□□□ -1.32
MACF1-228ENST00000528611 SYCE3A1L190 88 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 ZNF233A6NK53 670 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 BECN2A8MW95 431 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 C9IYK1 514 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 ABLIM1O14639 778 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 P4HA2O15460 535 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 EXTL3O43909 919 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 PRPF6O94906 941 aaKnown RBP6.78□□□□□ -1.32
MACF1-228ENST00000528611 MYBP10242 640 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 CYP3A5P20815 502 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 CASP1P29466 404 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 GTF2H1P32780 548 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 BMP8BP34820 402 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 HOXD13P35453 343 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 CASP5P51878 434 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 YARSP54577 528 aaKnown RBP6.78□□□□□ -1.32
MACF1-228ENST00000528611 SOX10P56693 466 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 CLDN10P78369 228 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 LSM11P83369 360 aaKnown RBP eCLIP6.78□□□□□ -1.32
MACF1-228ENST00000528611 MYL5Q02045 173 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 FPGSQ05932 587 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 ADAM9Q13443 819 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 MBTPS1Q14703 1052 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 GPNMBQ14956 572 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 UVSSAQ2YD98 709 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 DPCR1Q3MIW9 517 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 ZC2HC1CQ53FD0 456 aaPredicted RBP6.78□□□□□ -1.32
MACF1-228ENST00000528611 ARSIQ5FYB1 569 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 XKR4Q5GH76 650 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 TTI2Q6NXR4 508 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 ARMCX5Q6P1M9 558 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 GPD1LQ8N335 351 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 TMC2Q8TDI7 906 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 TMEM40Q8WWA1 233 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 NELFBQ8WX92 580 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 SPOCK2Q92563 424 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 WNT8BQ93098 351 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 LBHD1Q9BQE6 289 aaPredicted RBP6.78□□□□□ -1.32
MACF1-228ENST00000528611 TCHPQ9BT92 498 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 CCDC94Q9BW85 323 aaPredicted RBP6.78□□□□□ -1.32
MACF1-228ENST00000528611 TARS2Q9BW92 718 aaKnown RBP6.78□□□□□ -1.32
MACF1-228ENST00000528611 TRIM6Q9C030 488 aaPredicted RBP6.78□□□□□ -1.32
MACF1-228ENST00000528611 TSPY26PQ9H489 355 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 MINDY3Q9H8M7 445 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 CDHR5Q9HBB8 845 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 FAM105AQ9NUU6 356 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms