RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 SLITRK3O94933 977 aa10.58□□□□□ -0.72
SF3B2-206ENST00000528302 NDUFB10O96000 172 aa10.58□□□□□ -0.72
SF3B2-206ENST00000528302 KRT17Q04695 432 aa10.58□□□□□ -0.72
SF3B2-206ENST00000528302 PPATQ06203 517 aa10.58□□□□□ -0.72
SF3B2-206ENST00000528302 GABPAQ06546 454 aa10.58□□□□□ -0.72
SF3B2-206ENST00000528302 MPP2Q14168 576 aa10.58□□□□□ -0.72
SF3B2-206ENST00000528302 TMED2Q15363 201 aa10.58□□□□□ -0.72
SF3B2-206ENST00000528302 SGO2Q562F6 1265 aa10.58□□□□□ -0.72
SF3B2-206ENST00000528302 NAIF1Q69YI7 327 aaPredicted RBP10.58□□□□□ -0.72
SF3B2-206ENST00000528302 RNF207Q6ZRF8 634 aa10.58□□□□□ -0.72
SF3B2-206ENST00000528302 SLF2Q8IX21 1173 aa10.58□□□□□ -0.72
SF3B2-206ENST00000528302 ACSF2Q96CM8 615 aaPredicted RBP10.58□□□□□ -0.72
SF3B2-206ENST00000528302 CNOT10Q9H9A5 744 aaKnown RBP10.58□□□□□ -0.72
SF3B2-206ENST00000528302 KIF9Q9HAQ2 790 aa10.58□□□□□ -0.72
SF3B2-206ENST00000528302 ALG13Q9NP73 1137 aaKnown RBP10.58□□□□□ -0.72
SF3B2-206ENST00000528302 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.58□□□□□ -0.72
SF3B2-206ENST00000528302 KIAA1551Q9HCM1 1747 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 A0A1W2PRG0 241 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 PHF2O75151 1096 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 ARP10275 920 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 PSMC4P43686 418 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 JAG1P78504 1218 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 CNGA2Q16280 664 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 SYCP2LQ5T4T6 812 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 ZNF564Q8TBZ8 553 aaPredicted RBP10.57□□□□□ -0.72
SF3B2-206ENST00000528302 RSRC1Q96IZ7 334 aaKnown RBP10.57□□□□□ -0.72
SF3B2-206ENST00000528302 CRAMP1Q96RY5 1269 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 WDR18Q9BV38 432 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 ARHGEF35A5YM69 484 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 GOLGA8SH3BPF8 625 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 GOLGA8MH3BSY2 632 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 HIP1RO75146 1068 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 SNHG28P0DPA3 235 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 MMP13P45452 471 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 EIF3BP55884 814 aaKnown RBP10.57□□□□□ -0.72
SF3B2-206ENST00000528302 XRCC4Q13426 336 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 EPM2AIP1Q7L775 607 aaPredicted RBP10.57□□□□□ -0.72
SF3B2-206ENST00000528302 NOP9Q86U38 636 aaKnown RBP10.57□□□□□ -0.72
SF3B2-206ENST00000528302 SPDL1Q96EA4 605 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 TGS1Q96RS0 853 aaKnown RBP10.57□□□□□ -0.72
SF3B2-206ENST00000528302 NAP1L3Q99457 506 aaPredicted RBP10.57□□□□□ -0.72
SF3B2-206ENST00000528302 CARD9Q9H257 536 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 COL5A3P25940 1745 aaPredicted RBP10.57□□□□□ -0.72
SF3B2-206ENST00000528302 PITPNM2Q9BZ72 1349 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 ZMYM2Q9UBW7 1377 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 POLRMTO00411 1230 aaKnown RBP10.57□□□□□ -0.72
SF3B2-206ENST00000528302 PTGIRP43119 386 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 BFSP1Q12934 665 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 DNAJC3Q13217 504 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 C6orf118Q5T5N4 469 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 RFX8Q6ZV50 586 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 GSTA5Q7RTV2 222 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 CPXCR1Q8N123 301 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 C4orf33Q8N1A6 199 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 CPA5Q8WXQ8 436 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 ZSWIM1Q9BR11 485 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 C12orf65Q9H3J6 166 aaKnown RBP10.57□□□□□ -0.72
SF3B2-206ENST00000528302 SLCO1B3Q9NPD5 702 aa10.57□□□□□ -0.72
SF3B2-206ENST00000528302 CLRN2A0PK11 232 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 PI4K2BG5E9Z4 385 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 ECEL1O95672 775 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 EYA4O95677 639 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 APBA3O96018 575 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 PDHA1P08559 390 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 TARSP26639 723 aaKnown RBP10.56□□□□□ -0.72
SF3B2-206ENST00000528302 GCKP35557 465 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 COILP38432 576 aaPredicted RBP10.56□□□□□ -0.72
SF3B2-206ENST00000528302 NCALDP61601 193 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 GPC5P78333 572 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 ORC2Q13416 577 aaPredicted RBP10.56□□□□□ -0.72
SF3B2-206ENST00000528302 DRP2Q13474 957 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 COL23A1Q86Y22 540 aaPredicted RBP10.56□□□□□ -0.72
SF3B2-206ENST00000528302 FITM2Q8N6M3 262 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 SLC5A5Q92911 643 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 HERPUD2Q9BSE4 406 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 KDM4CQ9H3R0 1056 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 TDRD3Q9H7E2 651 aaKnown RBP10.56□□□□□ -0.72
SF3B2-206ENST00000528302 ETNK1Q9HBU6 452 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 FBXO28Q9NVF7 368 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 DONSONQ9NYP3 566 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 ANAPC7Q9UJX3 599 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 A0A1B0GUA9 196 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 C5orf60A6NFR6 353 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 hCG_1984214I3L0E3 225 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 SLC16A4O15374 487 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 SNX3O60493 162 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 CYP3A4P08684 503 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 CHRNB2P17787 502 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 ITGA8P53708 1063 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 PLCB4Q15147 1175 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 HYIQ5T013 277 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 EMC10Q5UCC4 262 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 ZNF720Q7Z2F6 126 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 VSIG1Q86XK7 387 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 ZNF713Q8N859 430 aaPredicted RBP10.56□□□□□ -0.72
SF3B2-206ENST00000528302 LXNQ9BS40 222 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 PAGR1Q9BTK6 254 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 NSRP1Q9H0G5 558 aaKnown RBP10.56□□□□□ -0.72
SF3B2-206ENST00000528302 C10orf88Q9H8K7 445 aa10.56□□□□□ -0.72
SF3B2-206ENST00000528302 MTUS1Q9ULD2 1270 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms