RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 AGBL3Q8NEM8 1001 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 ATXN2LQ8WWM7 1075 aaKnown RBP13.45□□□□□ -0.26
CAPN1-208ENST00000527323 STMN4Q9H169 189 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-208ENST00000527323 DONSONQ9NYP3 566 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 PLIN4Q96Q06 1357 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 EML1O00423 815 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 MSH4O15457 936 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 EXOC3O60645 756 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 SCP2P22307 547 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 CHRNA3P32297 505 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 MYL7Q01449 175 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 MAP2K1Q02750 393 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-208ENST00000527323 UBAP2Q5T6F2 1119 aaKnown RBP13.44□□□□□ -0.26
CAPN1-208ENST00000527323 ZNF746Q6NUN9 644 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-208ENST00000527323 OTUD6AQ7L8S5 288 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 FAM20AQ96MK3 541 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 P2RX7Q99572 595 aaKnown RBP13.44□□□□□ -0.26
CAPN1-208ENST00000527323 AMNQ9BXJ7 453 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 ZNF341Q9BYN7 854 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.44□□□□□ -0.261e-7■■■■■ 67.7
CAPN1-208ENST00000527323 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.44□□□□□ -0.26
CAPN1-208ENST00000527323 APEX2Q9UBZ4 518 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 PARP2Q9UGN5 583 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 PODXLO00592 558 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 TBX3O15119 743 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 MARCKSL1P49006 195 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 MKRN4PQ13434 485 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-208ENST00000527323 ITIH4Q14624 930 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 TAOK1Q7L7X3 1001 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 PIGWQ7Z7B1 504 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 CROCCP2Q86T23 111 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 RHOT2Q8IXI1 618 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 PRELID2Q8N945 189 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 MAGEC3Q8TD91 643 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 FAM151AQ8WW52 585 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 AGPAT1Q99943 283 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 ADAM7Q9H2U9 754 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 UBE2TQ9NPD8 197 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-208ENST00000527323 ATP8B3O60423 1300 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 QSER1Q2KHR3 1735 aa13.44□□□□□ -0.26
CAPN1-208ENST00000527323 ZBTB39O15060 712 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 VCAM1P19320 739 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 KCNJ1P48048 391 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 DRG2P55039 364 aaKnown RBP13.43□□□□□ -0.26
CAPN1-208ENST00000527323 NAA25Q14CX7 972 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 MOXD1Q6UVY6 613 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 FAM178BQ8IXR5 827 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 SLC20A1Q8WUM9 679 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 HOOK2Q96ED9 719 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 BORCS6Q96GS4 357 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 MBOAT7Q96N66 472 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 PARVGQ9HBI0 331 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 KCNK9Q9NPC2 374 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 GRHL1Q9NZI5 618 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 CEP83Q9Y592 693 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 STK24Q9Y6E0 443 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 RPTORQ8N122 1335 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 SYNGAP1Q96PV0 1343 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 Q4G0T1 1027 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 FBXO11Q86XK2 927 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 KIRREL3Q8IZU9 778 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 ABCF3Q9NUQ8 709 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 MTUS1Q9ULD2 1270 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 MIF4GDA9UHW6 222 aaKnown RBP13.43□□□□□ -0.26
CAPN1-208ENST00000527323 SPOPO43791 374 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 BCRP11274 1271 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 HSPA6P17066 643 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 PTGIRP43119 386 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 CALCOCO2Q13137 446 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 SLMAPQ14BN4 828 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 FMNL3Q8IVF7 1028 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 ANKRD42Q8N9B4 389 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 WRNIP1Q96S55 665 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 MLXIPLQ9NP71 852 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 OLFML3Q9NRN5 406 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 ZBTB21Q9ULJ3 1066 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
CAPN1-208ENST00000527323 A0A1B0GUA9 196 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 HGSO14964 777 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-208ENST00000527323 GSTA1P08263 222 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 COMTP21964 271 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 PDE6CP51160 858 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 SPP2Q13103 211 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 TTLL12Q14166 644 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-208ENST00000527323 ODR4Q5SWX8 454 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 PHLDB3Q6NSJ2 640 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 TTC27Q6P3X3 843 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 STXBP4Q6ZWJ1 553 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 LENG9Q96B70 501 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 DYDC2Q96IM9 177 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 RSRC1Q96IZ7 334 aaKnown RBP13.42□□□□□ -0.26
CAPN1-208ENST00000527323 HOMER3Q9NSC5 361 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 GPRC5DQ9NZD1 345 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 LAMA2P24043 3122 aaKnown RBP13.42□□□□□ -0.26
CAPN1-208ENST00000527323 RIPK2O43353 540 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 ACSL3O95573 720 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 FOSP01100 380 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-208ENST00000527323 GPC5P78333 572 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 MYO1EQ12965 1108 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 LONRF1Q17RB8 773 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms