RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MASP2	O00187	686 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MARCH6	O60337	910 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PPFIA4	O75335	1185 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	GJB6	O95452	261 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	C4BPA	P04003	597 aa	Known RBP	4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MC4R	P32245	332 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ECE1	P42892	770 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	RAB27A	P51159	221 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SESN3	P58005	492 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	C21orf58	P58505	322 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	KRTAP10-9	P60411	292 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	HERVK_113	P62684	666 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	DDR1	Q08345	913 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MOGS	Q13724	837 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	TAF7	Q15545	349 aa	Predicted RBP	4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	GPR19	Q15760	415 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	COLEC12	Q5KU26	742 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	C20orf194	Q5TEA3	1177 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CLEC4G	Q6UXB4	293 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ARHGAP36	Q6ZRI8	547 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	RHOU	Q7L0Q8	258 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	TADA2B	Q86TJ2	420 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ANKRD13B	Q86YJ7	626 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	HSCB	Q8IWL3	235 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PMFBP1	Q8TBY8	1022 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	RABGGTA	Q92696	567 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	LENG9	Q96B70	501 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	EVI5L	Q96CN4	794 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	BICD1	Q96G01	975 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CCDC34	Q96HJ3	373 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	RETREG1	Q9H6L5	497 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	TMOD4	Q9NZQ9	345 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CLIP2	Q9UDT6	1046 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PRKAG3	Q9UGI9	489 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ATP23	Q9Y6H3	246 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CCDC7	Q96M83	1385 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	POLA1	P09884	1462 aa	Predicted RBP	4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	XDH	P47989	1333 aa		4.21	□□□□□ -1.74
CLNS1A-209	ENST00000527299	BRD4	O60885	1362 aa	Predicted RBP	4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ROCK1	Q13464	1354 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299		A0A1B0GUA9	196 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PDLIM1	O00151	329 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MAN2B1	O00754	1011 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	WNT9A	O14904	365 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	TIMM44	O43615	452 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	TPPP	O94811	219 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	AMY2A	P04746	511 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	FGFR1	P11362	822 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	H2AFX	P16104	143 aa	Predicted RBP	4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ZNF24	P17028	368 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	AMY2B	P19961	511 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	COPB2	P35606	906 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MAN2A2	P49641	1150 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CCNH	P51946	323 aa	Predicted RBP	4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MNAT1	P51948	309 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	IQCB1	Q15051	598 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PREPL	Q4J6C6	727 aa	Predicted RBP	4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	GRAMD4	Q6IC98	578 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	C16orf87	Q6PH81	154 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SYCE2	Q6PIF2	218 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	OTUD6A	Q7L8S5	288 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SPATA21	Q7Z572	469 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	KIAA1328	Q86T90	577 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	VRK3	Q8IV63	474 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MYOCD	Q8IZQ8	938 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MIPOL1	Q8TD10	442 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	OSBP2	Q969R2	916 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ERO1A	Q96HE7	468 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	BBC3	Q96PG8	261 aa	Predicted RBP	4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ALG1	Q9BT22	464 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	AARSD1	Q9BTE6	412 aa	Known RBP	4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	OR10A5	Q9H207	317 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ACBD3	Q9H3P7	528 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	UNC45A	Q9H3U1	944 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	RIOX1	Q9H6W3	641 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ADARB2	Q9NS39	739 aa	Known RBP	4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ZNHIT2	Q9UHR6	403 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	FAM184B	Q9ULE4	1060 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	INPP5F	Q9Y2H2	1132 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	TMEM98	Q9Y2Y6	226 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ASXL2	Q76L83	1435 aa		4.2	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SCAF11	Q99590	1463 aa	Known RBP	4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CCNB3	Q8WWL7	1395 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299		A0A1W2PRX2	142 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SHTN1	A0MZ66	631 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	BLACE	A4D250	179 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	UNCX	A6NJT0	531 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299		F8VZ95	297 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	INO80B-WBP1	J3KQ70	363 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PRODH	O43272	600 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ERLIN1	O75477	346 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CCDC175	P0C221	793 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PNMA6A	P0CW24	399 aa	Predicted RBP	4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	HARS	P12081	509 aa	Known RBP	4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	GPT	P24298	496 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	NF2	P35240	595 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	STAT5B	P51692	787 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 363.7 ms