RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 REV1Q9UBZ9 1251 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 CTNNA3Q9UI47 895 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 CTDP1Q9Y5B0 961 aaPredicted RBP6.43□□□□□ -1.38
SF3B2-205ENST00000526653 VPS13AQ96RL7 3174 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 ZNF318Q5VUA4 2279 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 NCOR2Q9Y618 2525 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 TPRP12270 2363 aaKnown RBP6.43□□□□□ -1.38
SF3B2-205ENST00000526653 ROBO3Q96MS0 1386 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 PRR23AA6NEV1 266 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 PROB1E7EW31 1015 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 NPIPB6E9PJ23 425 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 SRGAP3O43295 1099 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 BAIAP3O94812 1187 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 GJB5O95377 273 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 ZSCAN22P10073 491 aaPredicted RBP6.42□□□□□ -1.38
SF3B2-205ENST00000526653 CYP2D6P10635 497 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 EEF2P13639 858 aaKnown RBP6.42□□□□□ -1.38
SF3B2-205ENST00000526653 AKR1B1P15121 316 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 COPB2P35606 906 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 ICA1Q05084 483 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 GPM6BQ13491 265 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 GPNMBQ14956 572 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 SMAD2Q15796 467 aaKnown RBP6.42□□□□□ -1.38
SF3B2-205ENST00000526653 TCTN1Q2MV58 587 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 CCDC158Q5M9N0 1113 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 IQSEC1Q6DN90 963 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 TMEM179Q6ZVK1 233 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 MAGEB6Q8N7X4 407 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 PDZD8Q8NEN9 1154 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 REPS2Q8NFH8 660 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 BAHD1Q8TBE0 780 aaPredicted RBP6.42□□□□□ -1.38
SF3B2-205ENST00000526653 CRELD1Q96HD1 420 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 RHOVQ96L33 236 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 TEX13BQ9BXU2 312 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 PRKRIP1Q9H875 184 aaPredicted RBP6.42□□□□□ -1.38
SF3B2-205ENST00000526653 HOMER2Q9NSB8 354 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 POLR3KQ9Y2Y1 108 aaPredicted RBP6.42□□□□□ -1.38
SF3B2-205ENST00000526653 CHD6Q8TD26 2715 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 MYH13Q9UKX3 1938 aa6.42□□□□□ -1.38
SF3B2-205ENST00000526653 CHURC1-FNTBB4DL54 471 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 ETV2O00321 342 aaPredicted RBP6.41□□□□□ -1.38
SF3B2-205ENST00000526653 MBTPS2O43462 519 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 ZBED4O75132 1171 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 PDGFBP01127 241 aaPredicted RBP6.41□□□□□ -1.38
SF3B2-205ENST00000526653 MED14OSP0DP75 135 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 GBP2P32456 591 aaPredicted RBP6.41□□□□□ -1.38
SF3B2-205ENST00000526653 GABPAQ06546 454 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 G3BP1Q13283 466 aaKnown RBP eCLIP6.41□□□□□ -1.384e-7■□□□□ 10.4
SF3B2-205ENST00000526653 BFSP2Q13515 415 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 EPC2Q52LR7 807 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 TAPT1Q6NXT6 567 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.41□□□□□ -1.38
SF3B2-205ENST00000526653 ATG14Q6ZNE5 492 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 DGLUCYQ7Z3D6 616 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 FRMD5Q7Z6J6 570 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 PRPF38AQ8NAV1 312 aaKnown RBP6.41□□□□□ -1.38
SF3B2-205ENST00000526653 SSH1Q8WYL5 1049 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 KREMEN1Q96MU8 473 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 TMEM74Q96NL1 305 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 SH2D4AQ9H788 454 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 KLHL3Q9UH77 587 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 INSL6Q9Y581 213 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 PTPRCP08575 1304 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 TECTAO75443 2155 aa6.41□□□□□ -1.38
SF3B2-205ENST00000526653 FAM186AA6NE01 2351 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 BAHCC1Q9P281 2608 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 SHISA3A0PJX4 238 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 H3BNC9 293 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 CSPG5O95196 566 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 HTR3BO95264 441 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 GLDCP23378 1020 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 GTF2F1P35269 517 aaKnown RBP eCLIP6.4□□□□□ -1.38
SF3B2-205ENST00000526653 PURAQ00577 322 aaKnown RBP6.4□□□□□ -1.38
SF3B2-205ENST00000526653 TAGLNQ01995 201 aaKnown RBP6.4□□□□□ -1.38
SF3B2-205ENST00000526653 FAM160A1Q05DH4 1040 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 TIGD5Q53EQ6 642 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 RPAINQ86UA6 219 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 RELL1Q8IUW5 271 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 OXR1Q8N573 874 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 NKD2Q969F2 451 aaPredicted RBP6.4□□□□□ -1.38
SF3B2-205ENST00000526653 RMDN1Q96DB5 314 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 RPGRIP1Q96KN7 1286 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 SLF1Q9BQI6 1058 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 MTG1Q9BT17 334 aaPredicted RBP6.4□□□□□ -1.38
SF3B2-205ENST00000526653 RSRP1Q9BUV0 290 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 HDAC5Q9UQL6 1122 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 Q9Y3F1 56 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 ATAD5Q96QE3 1844 aa6.4□□□□□ -1.38
SF3B2-205ENST00000526653 MYO15AQ9UKN7 3530 aa6.4□□□□□ -1.39
SF3B2-205ENST00000526653 FRYLO94915 3013 aa6.4□□□□□ -1.39
SF3B2-205ENST00000526653 CFAP47Q6ZTR5 3102 aa6.4□□□□□ -1.39
SF3B2-205ENST00000526653 ZNF292O60281 2723 aa6.4□□□□□ -1.39
SF3B2-205ENST00000526653 EP300Q09472 2414 aaPredicted RBP6.39□□□□□ -1.39
SF3B2-205ENST00000526653 GVINP1Q7Z2Y8 2422 aa6.39□□□□□ -1.39
SF3B2-205ENST00000526653 ATRXP46100 2492 aa6.39□□□□□ -1.39
SF3B2-205ENST00000526653 GBF1Q92538 1859 aa6.39□□□□□ -1.39
SF3B2-205ENST00000526653 CYP2D7A0A087X1C5 515 aa6.39□□□□□ -1.39
SF3B2-205ENST00000526653 ABHD14A-ACY1A0A1B0GW23 586 aa6.39□□□□□ -1.39
SF3B2-205ENST00000526653 FITM1A5D6W6 292 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms