RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 SPATA4Q8NEY3 305 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 PNMA2Q9UL42 364 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 EXOC3O60645 756 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 OR52Z1P0C646 297 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 HSPA6P17066 643 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 IREB2P48200 963 aaKnown RBP13.1□□□□□ -0.31
FGFR1-227ENST00000526570 NR1H3Q13133 447 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 APOA5Q6Q788 366 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 CENPUQ71F23 418 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 DPP9Q86TI2 863 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 LINC00116Q8NCU8 138 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 PI4K2BQ8TCG2 481 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 CDKL2Q92772 493 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 CD209Q9NNX6 404 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 RPAP1Q9BWH6 1393 aaPredicted RBP13.1□□□□□ -0.31
FGFR1-227ENST00000526570 ECEL1O95672 775 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 CTTNQ14247 550 aaKnown RBP13.1□□□□□ -0.31
FGFR1-227ENST00000526570 SFR1Q86XK3 245 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 SYMPKQ92797 1274 aaKnown RBP13.1□□□□□ -0.31
FGFR1-227ENST00000526570 HDAC11Q96DB2 347 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 DISC1Q9NRI5 854 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 RWDD2AQ9UIY3 292 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 ANAPC5Q9UJX4 755 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 FRMPD1Q5SYB0 1578 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 CCDC188H7C350 402 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 CPP00450 1065 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 BMP3P12645 472 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 RECQLP46063 649 aaPredicted RBP13.1□□□□□ -0.31
FGFR1-227ENST00000526570 CDK8P49336 464 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 ZNF280DQ6N043 979 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 FRA10AC1Q70Z53 315 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 FBXL13Q8NEE6 735 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 DCTN4Q9UJW0 460 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 ABT1Q9ULW3 272 aaKnown RBP13.1□□□□□ -0.31
FGFR1-227ENST00000526570 NCK2O43639 380 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 MYBL2P10244 700 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 PRDX5P30044 214 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 CHRNA5P30532 468 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 CCT3P49368 545 aaKnown RBP13.1□□□□□ -0.31
FGFR1-227ENST00000526570 LMBRD2Q68DH5 695 aaPredicted RBP13.1□□□□□ -0.31
FGFR1-227ENST00000526570 BARGINQ6ZT62 677 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 EPM2AIP1Q7L775 607 aaPredicted RBP13.1□□□□□ -0.31
FGFR1-227ENST00000526570 DEPTORQ8TB45 409 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 DPF2Q92785 391 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 DEPDC7Q96QD5 511 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 PIGSQ96S52 555 aa13.1□□□□□ -0.31
FGFR1-227ENST00000526570 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.1□□□□□ -0.31
FGFR1-227ENST00000526570 BCRP11274 1271 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 CCNA1P78396 465 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 XKR9Q5GH70 373 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 PAIP1Q9H074 479 aaKnown RBP13.09□□□□□ -0.31
FGFR1-227ENST00000526570 MAFGO15525 162 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 TRIM49P0CI25 452 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 TRIM49CP0CI26 452 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 STAT1P42224 750 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 KCNA1Q09470 495 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 CCDC153Q494R4 210 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 AGBL2Q5U5Z8 902 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 MB21D1Q8N884 522 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 ZNF180Q9UJW8 692 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 GRID2IPA4D2P6 1211 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 PALMO75781 387 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 CLPTM1O96005 669 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 MAP3K10Q02779 954 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 STK4Q13043 487 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 DNAL1Q4LDG9 190 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 TRAPPC9Q96Q05 1148 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 RNF181Q9P0P0 153 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 BLOC1S6Q9UL45 172 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 KRT19P08727 400 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 ACTN1P12814 892 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 PRAMEP78395 509 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 SLC9A5Q14940 896 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 ZC3H12BQ5HYM0 836 aaKnown RBP13.09□□□□□ -0.31
FGFR1-227ENST00000526570 FMR1NBQ8N0W7 255 aaPredicted RBP13.09□□□□□ -0.31
FGFR1-227ENST00000526570 ADNPQ9H2P0 1102 aa13.09□□□□□ -0.31
FGFR1-227ENST00000526570 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.09□□□□□ -0.31
FGFR1-227ENST00000526570 DDR1Q08345 913 aa13.08□□□□□ -0.31
FGFR1-227ENST00000526570 USP17L2Q6R6M4 530 aa13.08□□□□□ -0.31
FGFR1-227ENST00000526570 RASGRP4Q8TDF6 673 aa13.08□□□□□ -0.31
FGFR1-227ENST00000526570 ATP8B4Q8TF62 1192 aa13.08□□□□□ -0.31
FGFR1-227ENST00000526570 CORO1CQ9ULV4 474 aaPredicted RBP13.08□□□□□ -0.31
FGFR1-227ENST00000526570 L3MBTL1Q9Y468 752 aa13.08□□□□□ -0.31
FGFR1-227ENST00000526570 OATP04181 439 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 KRT16P08779 473 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 ITIH4Q14624 930 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 SDE2Q6IQ49 451 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 WDR93Q6P2C0 686 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 REXO1L1PQ8IX06 675 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 FUKQ8N0W3 1084 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 TDRD3Q9H7E2 651 aaKnown RBP13.08□□□□□ -0.32
FGFR1-227ENST00000526570 RAB20Q9NX57 234 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 RASA4BC9J798 803 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 F8VZ95 297 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 SH2B2O14492 632 aaPredicted RBP13.08□□□□□ -0.32
FGFR1-227ENST00000526570 RASA4O43374 803 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 CBFA2T3O75081 653 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 HSPA13P48723 471 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 C21orf59P57076 290 aa13.08□□□□□ -0.32
FGFR1-227ENST00000526570 TMPRSS15P98073 1019 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms