RNA–Protein interactions for RNA: ENST00000526258.5

KDM2A-207, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 5,671 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-207ENST00000526258 MECOMQ03112 1051 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 CCDC142Q17RM4 750 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 PCNX4Q63HM2 1172 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 AGR3Q8TD06 166 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 C1orf54Q8WWF1 131 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 CASKIN2Q8WXE0 1202 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 SNX19Q92543 992 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 RUBCNLQ9H714 662 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 TESPA1A2RU30 521 aaPredicted RBP13.72□□□□□ -0.21
KDM2A-207ENST00000526258 LRRIQ4A6NIV6 560 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 FOXN1O15353 648 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 PPIP5K2O43314 1243 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 HSPA1AP0DMV8 641 aaKnown RBP13.72□□□□□ -0.21
KDM2A-207ENST00000526258 HSPA1BP0DMV9 641 aaKnown RBP13.72□□□□□ -0.21
KDM2A-207ENST00000526258 CBX3Q13185 183 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 HIF1AQ16665 826 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 LVRNQ6Q4G3 990 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 SZRD1Q7Z422 152 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 ZCCHC7Q8N3Z6 543 aaKnown RBP13.72□□□□□ -0.21
KDM2A-207ENST00000526258 USP38Q8NB14 1042 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 LPIN2Q92539 896 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 ZWILCHQ9H900 591 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 C20orf96Q9NUD7 363 aaPredicted RBP13.72□□□□□ -0.21
KDM2A-207ENST00000526258 HEY2Q9UBP5 337 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 TMCO1Q9UM00 188 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 GMEB1Q9Y692 573 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 FRMPD2Q68DX3 1309 aaPredicted RBP13.72□□□□□ -0.21
KDM2A-207ENST00000526258 USP17L12C9JPN9 530 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 USP17L21D6R901 530 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 RAPGEF3O95398 923 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 BCL10O95999 233 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 BRDTQ58F21 947 aaPredicted RBP13.72□□□□□ -0.21
KDM2A-207ENST00000526258 PNMA1Q8ND90 353 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 PLBD2Q8NHP8 589 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 RASGRP4Q8TDF6 673 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 TGFBRAP1Q8WUH2 860 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 ADAM33Q9BZ11 813 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 WNT8AQ9H1J5 351 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 EHD4Q9H223 541 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 PCIF1Q9H4Z3 704 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 EXOSC4Q9NPD3 245 aaKnown RBP13.72□□□□□ -0.21
KDM2A-207ENST00000526258 IFT140Q96RY7 1462 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 KLRF2D3W0D1 207 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 CFAP99D6REC4 459 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 CDC27P30260 824 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 HADHAP40939 763 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 STK4Q13043 487 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 PDAP1Q13442 181 aaKnown RBP13.72□□□□□ -0.21
KDM2A-207ENST00000526258 SHC4Q6S5L8 630 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 METTL16Q86W50 562 aaKnown RBP13.72□□□□□ -0.21
KDM2A-207ENST00000526258 RFFLQ8WZ73 363 aa13.72□□□□□ -0.21
KDM2A-207ENST00000526258 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.72□□□□□ -0.213e-8■■■■■ 70.6
KDM2A-207ENST00000526258 ZNF184Q99676 751 aaPredicted RBP13.72□□□□□ -0.21
KDM2A-207ENST00000526258 CCDC149Q6ZUS6 474 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 TAS2R42Q7RTR8 314 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 TMC4Q7Z404 712 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 PSMC3IPQ9P2W1 217 aaPredicted RBP13.71□□□□□ -0.21
KDM2A-207ENST00000526258 CNOT8Q9UFF9 292 aaKnown RBP13.71□□□□□ -0.21
KDM2A-207ENST00000526258 DNAJC12Q9UKB3 198 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 UBE4BO95155 1302 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 ARHGEF37A1IGU5 675 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 PHF2O75151 1096 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 ITIH2P19823 946 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 COPAP53621 1224 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 FMR1Q06787 632 aaKnown RBP eCLIP13.71□□□□□ -0.213e-6■■■□□ 16
KDM2A-207ENST00000526258 KCNMA1Q12791 1236 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 C1orf228Q6PIY5 440 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 PRCCQ92733 491 aaPredicted RBP13.71□□□□□ -0.21
KDM2A-207ENST00000526258 EYA3Q99504 573 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 ZBED4O75132 1171 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 TNFAIP8O95379 198 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 GSNP06396 782 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 KRT16P08779 473 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 GAP43P17677 238 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 NSUN2Q08J23 767 aaKnown RBP eCLIP13.71□□□□□ -0.21
KDM2A-207ENST00000526258 NDUFA5Q16718 116 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 TBC1D10BQ4KMP7 808 aaPredicted RBP13.71□□□□□ -0.21
KDM2A-207ENST00000526258 TMEM63BQ5T3F8 832 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 LRRC39Q96DD0 335 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 C9orf72Q96LT7 481 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 MAGEB18Q96M61 343 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 MANSC1Q9H8J5 431 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 RNPEPL1Q9HAU8 725 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 APPL1Q9UKG1 709 aa13.71□□□□□ -0.21
KDM2A-207ENST00000526258 KIF14Q15058 1648 aa13.71□□□□□ -0.22
KDM2A-207ENST00000526258 LOC100653049A0A140TA62 436 aa13.71□□□□□ -0.22
KDM2A-207ENST00000526258 KRT34O76011 436 aa13.71□□□□□ -0.22
KDM2A-207ENST00000526258 TCN1P20061 433 aaPredicted RBP13.71□□□□□ -0.22
KDM2A-207ENST00000526258 TRMT5Q32P41 509 aaKnown RBP13.71□□□□□ -0.22
KDM2A-207ENST00000526258 PROM2Q8N271 834 aa13.71□□□□□ -0.22
KDM2A-207ENST00000526258 TTC13Q8NBP0 860 aa13.71□□□□□ -0.22
KDM2A-207ENST00000526258 DEPDC7Q96QD5 511 aa13.71□□□□□ -0.22
KDM2A-207ENST00000526258 ZNF180Q9UJW8 692 aa13.71□□□□□ -0.22
KDM2A-207ENST00000526258 CARD8Q9Y2G2 431 aa13.71□□□□□ -0.22
KDM2A-207ENST00000526258 SUGT1Q9Y2Z0 365 aa13.71□□□□□ -0.22
KDM2A-207ENST00000526258 SH2B2O14492 632 aaPredicted RBP13.7□□□□□ -0.22
KDM2A-207ENST00000526258 XPOTO43592 962 aaKnown RBP13.7□□□□□ -0.22
KDM2A-207ENST00000526258 EFCAB14O75071 495 aa13.7□□□□□ -0.22
KDM2A-207ENST00000526258 IL12RB1P42701 662 aa13.7□□□□□ -0.22
KDM2A-207ENST00000526258 CAVIN3Q969G5 261 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms