RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 ZMYND10O75800 440 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 TDP2O95551 362 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 CD72P21854 359 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 SDHBP21912 280 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 USP11P51784 963 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 LMNB2Q03252 620 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 TSGA10IPQ3SY00 556 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 RNF20Q5VTR2 975 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 LILRA6Q6PI73 481 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 TSSK4Q6SA08 328 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 GPR161Q8N6U8 529 aaKnown RBP13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 ZBTB44Q8NCP5 570 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 TMEM143Q96AN5 459 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 JPH2Q9BR39 696 aaPredicted RBP13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 APOL6Q9BWW8 343 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 LTB4R2Q9NPC1 389 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 VPS54Q9P1Q0 977 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 FNIP2Q9P278 1114 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 CDH7Q9ULB5 785 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 USP18Q9UMW8 372 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 ZFP37Q9Y6Q3 630 aaPredicted RBP13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 COL4A2P08572 1712 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 CCDC196A0A1B0GTZ2 297 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 FAM170BA6NMN3 283 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 EIF5BO60841 1220 aaKnown RBP13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 ERLIN2O94905 339 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 C1RP00736 705 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 HSPA4P34932 840 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 PSMC5P62195 406 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 PRKCQQ04759 706 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 LAMTOR4Q0VGL1 99 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 ST3GAL2Q16842 350 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 USP41Q3LFD5 358 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 Q4G0T1 1027 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 SLC44A4Q53GD3 710 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 PRSS55Q6UWB4 352 aaPredicted RBP13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 RASEFQ8IZ41 740 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 CNNM3Q8NE01 707 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 CCDC148Q8NFR7 591 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 TBCKQ8TEA7 893 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 PRPF31Q8WWY3 499 aaKnown RBP13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 PSPC1Q8WXF1 523 aaKnown RBP13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 SLC7A3Q8WY07 619 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 RABGGTAQ92696 567 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 SECISBP2LQ93073 1101 aaKnown RBP13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 CPB2Q96IY4 423 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 MBOAT7Q96N66 472 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 EPC1Q9H2F5 836 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 UBN1Q9NPG3 1134 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 ZSCAN32Q9NX65 697 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 CACNG4Q9UBN1 327 aa13.94□□□□□ -0.18
CCDC90B-205ENST00000525916 PRR5-ARHGAP8B1AHC4 643 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 EML1O00423 815 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 LILRB5O75023 590 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 CPA1P15085 419 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 TGM1P22735 817 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 TARSP26639 723 aaKnown RBP13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 ARHGAP8P85298 464 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 MTSS1LQ765P7 747 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 RNF149Q8NC42 400 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 ETNPPLQ8TBG4 499 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 FGF13Q92913 245 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 BORCS6Q96GS4 357 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 CEP170P1Q96L14 293 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 KXD1Q9BQD3 176 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 RTKNQ9BST9 563 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 COLEC11Q9BWP8 271 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 OSBPL6Q9BZF3 934 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 NXF3Q9H4D5 531 aaKnown RBP13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 DHX33Q9H6R0 707 aaKnown RBP13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 PARD6AQ9NPB6 346 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 WRAP73Q9P2S5 460 aaPredicted RBP13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 FBXW11Q9UKB1 542 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 ADAM28Q9UKQ2 775 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 NID2Q14112 1375 aa13.93□□□□□ -0.18
CCDC90B-205ENST00000525916 CCL16O15467 120 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 TSPAN1O60635 241 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 NR1I2O75469 434 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 ADRB1P08588 477 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 MAGEA9P43362 315 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 FGD1P98174 961 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 AKAP17AQ02040 695 aaKnown RBP13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 RTP2Q5QGT7 225 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 TPRG1Q6ZUI0 275 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 GPR65Q8IYL9 337 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 ITFG1Q8TB96 612 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 NELL1Q92832 810 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 PHF20Q9BVI0 1012 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 SLC26A6Q9BXS9 759 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 POLIQ9UNA4 740 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 GREB1Q4ZG55 1949 aa13.92□□□□□ -0.18
CCDC90B-205ENST00000525916 USP24Q9UPU5 2620 aa13.91□□□□□ -0.18
CCDC90B-205ENST00000525916 SEC24BO95487 1268 aa13.91□□□□□ -0.18
CCDC90B-205ENST00000525916 C8AP07357 584 aa13.91□□□□□ -0.18
CCDC90B-205ENST00000525916 AKAP5P24588 427 aa13.91□□□□□ -0.18
CCDC90B-205ENST00000525916 QARSP47897 775 aaKnown RBP13.91□□□□□ -0.18
CCDC90B-205ENST00000525916 NLRP5P59047 1200 aa13.91□□□□□ -0.18
CCDC90B-205ENST00000525916 PFKPQ01813 784 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms