RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 SOD2P04179 222 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 PRKCBP05771 671 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 URODP06132 367 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 AKAP5P24588 427 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 GJB2P29033 226 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 MTHFRP42898 656 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 GRIK3Q13003 919 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 ECM1Q16610 540 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 APBB1IPQ7Z5R6 666 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-209ENST00000525854 CABP7Q86V35 215 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 CDR2LQ86X02 465 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-209ENST00000525854 SLC22A17Q8WUG5 538 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 RIPOR3Q96MK2 946 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 TBC1D32Q96NH3 1257 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 RPS6KC1Q96S38 1066 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 HERC2P3Q9BVR0 1158 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 APOL5Q9BWW9 433 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 SMC3Q9UQE7 1217 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 NR2E1Q9Y466 385 aa12.84□□□□□ -0.35
HIF3A-209ENST00000525854 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 SSBP05455 408 aaKnown RBP eCLIP12.83□□□□□ -0.36
HIF3A-209ENST00000525854 LIG1P18858 919 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 KLRC2P26717 231 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 GLUD2P49448 558 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 ATAT1Q5SQI0 421 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 KIAA1841Q6NSI8 718 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 ELMSAN1Q6PJG2 1045 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 KCTD17Q8N5Z5 321 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 GSTCDQ8NEC7 633 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 EDAQ92838 391 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 DRC1Q96MC2 740 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 KLHL5Q96PQ7 755 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 CCDC113Q9H0I3 377 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 PDZD7Q9H5P4 517 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 MARCH5Q9NX47 278 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 MIOSQ9NXC5 875 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 RAPGEFL1Q9UHV5 662 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 PHLPP2Q6ZVD8 1323 aa12.83□□□□□ -0.36
HIF3A-209ENST00000525854 LILRB3O75022 631 aa12.82□□□□□ -0.36
HIF3A-209ENST00000525854 CD2BP2O95400 341 aaKnown RBP12.82□□□□□ -0.36
HIF3A-209ENST00000525854 ADH1AP07327 375 aa12.82□□□□□ -0.36
HIF3A-209ENST00000525854 CNPP09543 421 aaKnown RBP12.82□□□□□ -0.36
HIF3A-209ENST00000525854 EPCAMP16422 314 aa12.82□□□□□ -0.36
HIF3A-209ENST00000525854 ATP2C1P98194 919 aaPredicted RBP12.82□□□□□ -0.36
HIF3A-209ENST00000525854 IL17AQ16552 155 aa12.82□□□□□ -0.36
HIF3A-209ENST00000525854 DCAF4L1Q3SXM0 396 aa12.82□□□□□ -0.36
HIF3A-209ENST00000525854 RARS2Q5T160 578 aaKnown RBP12.82□□□□□ -0.36
HIF3A-209ENST00000525854 ARL6IP4Q66PJ3 421 aaKnown RBP12.82□□□□□ -0.36
HIF3A-209ENST00000525854 FBXL18Q96ME1 805 aa12.82□□□□□ -0.36
HIF3A-209ENST00000525854 SFXN1Q9H9B4 322 aa12.82□□□□□ -0.36
HIF3A-209ENST00000525854 C17orf75Q9HAS0 396 aa12.82□□□□□ -0.36
HIF3A-209ENST00000525854 KLK14Q9P0G3 267 aa12.82□□□□□ -0.36
HIF3A-209ENST00000525854 DPP7Q9UHL4 492 aa12.82□□□□□ -0.36
HIF3A-209ENST00000525854 KCNG1Q9UIX4 513 aa12.82□□□□□ -0.36
HIF3A-209ENST00000525854 CCDC169A6NNP5 214 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 PP2D1A8MPX8 630 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 E9PMD0 336 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 K7ERI5 159 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 C2CD2LO14523 706 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 EFEMP2O95967 443 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 CDC25AP30304 524 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 CLCN4P51793 760 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 DSG1Q02413 1049 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 CREMQ03060 361 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 DMP1Q13316 513 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-209ENST00000525854 TUSC3Q13454 348 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 ZRSR1Q15695 479 aaKnown RBP12.81□□□□□ -0.36
HIF3A-209ENST00000525854 USP41Q3LFD5 358 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 LARP1BQ659C4 914 aaKnown RBP12.81□□□□□ -0.36
HIF3A-209ENST00000525854 GPR65Q8IYL9 337 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 RNF168Q8IYW5 571 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-209ENST00000525854 C12orf76Q8N812 135 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-209ENST00000525854 FAM122AQ96E09 287 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 CDK5RAP3Q96JB5 506 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 KIFC3Q9BVG8 833 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 TIPINQ9BVW5 301 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 NT5C3AQ9H0P0 336 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 POMKQ9H5K3 350 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 TSHZ2Q9NRE2 1034 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.81□□□□□ -0.36
HIF3A-209ENST00000525854 ADAM28Q9UKQ2 775 aa12.81□□□□□ -0.36
HIF3A-209ENST00000525854 RBM19Q9Y4C8 960 aaKnown RBP12.81□□□□□ -0.36
HIF3A-209ENST00000525854 TTLL13PA6NNM8 815 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 SLC26A4O43511 780 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 HIP1RO75146 1068 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 TADA2AO75478 443 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 RECQL4O94761 1208 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 BMP15O95972 392 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 C1RP00736 705 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 THP07101 528 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 PLA2G5P39877 138 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 NPTX2P47972 431 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 PEX3P56589 373 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 ZXDAP98168 799 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 HSP90AA2PQ14568 343 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-209ENST00000525854 HYIQ5T013 277 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 ATF7IP2Q5U623 682 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 KIAA0319Q5VV43 1072 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 FUT10Q6P4F1 479 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 TMC5Q6UXY8 1006 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms