RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 PTGISQ16647 500 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 ZNF792Q3KQV3 632 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 CFAP221Q4G0U5 840 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 PLA2G2CQ5R387 149 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 CFAP58Q5T655 872 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 CCDC181Q5TID7 509 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 SFMBT2Q5VUG0 894 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 C6orf89Q6UWU4 347 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 B4GALNT4Q76KP1 1039 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 RNF135Q8IUD6 432 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 TDHQ8IZJ6 230 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 REXO1Q8N1G1 1221 aaKnown RBP8.5□□□□□ -1.05
SPIDR-223ENST00000524033 SH2D3CQ8N5H7 860 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 C3orf20Q8ND61 904 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 GLIS3Q8NEA6 775 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 REPS2Q8NFH8 660 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 OLIG1Q8TAK6 271 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 SCFD2Q8WU76 684 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 CEP95Q96GE4 821 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 RNPC3Q96LT9 517 aaKnown RBP8.5□□□□□ -1.05
SPIDR-223ENST00000524033 DRC1Q96MC2 740 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 CCDC43Q96MW1 224 aaKnown RBP8.5□□□□□ -1.05
SPIDR-223ENST00000524033 TSG101Q99816 390 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 LBHD1Q9BQE6 289 aaPredicted RBP8.5□□□□□ -1.05
SPIDR-223ENST00000524033 TINF2Q9BSI4 451 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 LSM14BQ9BX40 385 aaKnown RBP8.5□□□□□ -1.05
SPIDR-223ENST00000524033 TEX13BQ9BXU2 312 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 PPP1R12CQ9BZL4 782 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 DEF6Q9H4E7 631 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 MMRN2Q9H8L6 949 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 A1CFQ9NQ94 594 aaKnown RBP8.5□□□□□ -1.05
SPIDR-223ENST00000524033 TMEM260Q9NX78 707 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 PRKAG2Q9UGJ0 569 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 FEM1BQ9UK73 627 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 DIS3Q9Y2L1 958 aaKnown RBP8.5□□□□□ -1.05
SPIDR-223ENST00000524033 COL4A3BPQ9Y5P4 624 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 NFS1Q9Y697 457 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 UNC80Q8N2C7 3258 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 C5orf60A6NFR6 353 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 ZSCAN5CA6NGD5 496 aaPredicted RBP8.49□□□□□ -1.05
SPIDR-223ENST00000524033 RAD51CO43502 376 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 BUB1O43683 1085 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 PALMO75781 387 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 ERLIN2O94905 339 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 TDP2O95551 362 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 GNA14O95837 355 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 PAEPP09466 180 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 RARBP10826 455 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 NR1D1P20393 614 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 CXCR5P32302 372 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 LSP1P33241 339 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 ADCYAP1R1P41586 468 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 LIG3P49916 1009 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 USP11P51784 963 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 GTF2A1P52655 376 aaPredicted RBP8.49□□□□□ -1.05
SPIDR-223ENST00000524033 WNT7BP56706 349 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 MRPS25P82663 173 aaKnown RBP8.49□□□□□ -1.05
SPIDR-223ENST00000524033 FKBP3Q00688 224 aaKnown RBP8.49□□□□□ -1.05
SPIDR-223ENST00000524033 ITGB3BPQ13352 177 aaPredicted RBP8.49□□□□□ -1.05
SPIDR-223ENST00000524033 PLCB4Q15147 1175 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 LRRC41Q15345 812 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 UAP1Q16222 522 aaPredicted RBP8.49□□□□□ -1.05
SPIDR-223ENST00000524033 ECM1Q16610 540 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 TMEM266Q2M3C6 531 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 LRIT3Q3SXY7 679 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 NAA35Q5VZE5 725 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 SNRNP48Q6IEG0 339 aaKnown RBP8.49□□□□□ -1.05
SPIDR-223ENST00000524033 PPP4R3AQ6IN85 833 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 SLC39A5Q6ZMH5 540 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 MYOCDQ8IZQ8 938 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 CPXCR1Q8N123 301 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 MICALL1Q8N3F8 863 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 LRRC57Q8N9N7 239 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 USP38Q8NB14 1042 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 GMCL1P1Q8NEA9 526 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 FAM174AQ8TBP5 190 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 ZNF473Q8WTR7 871 aaKnown RBP8.49□□□□□ -1.05
SPIDR-223ENST00000524033 EEF2KMTQ96G04 330 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 MS4A14Q96JA4 679 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 ATP6V1G3Q96LB4 118 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 PIGSQ96S52 555 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 RUFY1Q96T51 708 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 ISCUQ9H1K1 167 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 EPN3Q9H201 632 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 KCTD10Q9H3F6 313 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 CPVLQ9H3G5 476 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 XPNPEP3Q9NQH7 507 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 NFU1Q9UMS0 254 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 SYNPO2Q9UMS6 1093 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 ATP11BQ9Y2G3 1177 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 STXBP5LQ9Y2K9 1186 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 RIPK3Q9Y572 518 aa8.49□□□□□ -1.05
SPIDR-223ENST00000524033 ATP2A1O14983 1001 aa8.48□□□□□ -1.05
SPIDR-223ENST00000524033 MEFVO15553 781 aaPredicted RBP8.48□□□□□ -1.05
SPIDR-223ENST00000524033 KIF4AO95239 1232 aa8.48□□□□□ -1.05
SPIDR-223ENST00000524033 GOLGA8HP0CJ92 632 aa8.48□□□□□ -1.05
SPIDR-223ENST00000524033 PDHBP11177 359 aa8.48□□□□□ -1.05
SPIDR-223ENST00000524033 BMP3P12645 472 aa8.48□□□□□ -1.05
SPIDR-223ENST00000524033 TAL1P17542 331 aaPredicted RBP8.48□□□□□ -1.05
SPIDR-223ENST00000524033 HNRNPH1P31943 449 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms