RNA–Protein interactions for RNA: ENST00000523842.1

EFCAB13-212, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-212ENST00000523842 USP15Q9Y4E8 981 aaPredicted RBP3.94□□□□□ -1.78
EFCAB13-212ENST00000523842 CCDC78A2IDD5 438 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 PRR5-ARHGAP8B1AHC4 643 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 RNASET2O00584 256 aaKnown RBP3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 SPDEFO95238 335 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 SEC24CP53992 1094 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 APBA1Q02410 837 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 LRRC32Q14392 662 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 MFSD14BQ5SR56 506 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 STRIP1Q5VSL9 837 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 ZKSCAN2Q63HK3 967 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 FBXO42Q6P3S6 717 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 LMBR1LQ6UX01 489 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 DOK3Q7L591 496 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 RD3Q7Z3Z2 195 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 SLC41A1Q8IVJ1 513 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 ARHGEF19Q8IW93 802 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 DHX37Q8IY37 1157 aaKnown RBP3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 SMC1BQ8NDV3 1235 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 SUPT20HQ8NEM7 779 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 CAVIN3Q969G5 261 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 PDCD2LQ9BRP1 358 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 ALG13Q9NP73 1137 aaKnown RBP3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 ADARB2Q9NS39 739 aaKnown RBP3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 TMEM260Q9NX78 707 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 POGKQ9P215 609 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 MAGEC2Q9UBF1 373 aaPredicted RBP3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 SPATA31A6Q5VVP1 1343 aa3.93□□□□□ -1.78
EFCAB13-212ENST00000523842 ST20-MTHFSA0A0A6YYL1 179 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 ITGA10O75578 1167 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 RFPL3O75679 317 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 HSP90B1P14625 803 aaKnown RBP3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 ADCYAP1R1P41586 468 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 KPNA1P52294 538 aaPredicted RBP3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 CHN2P52757 468 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 USP14P54578 494 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 RESTQ13127 1097 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 CT83Q5H943 113 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 PITRM1Q5JRX3 1037 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 PRAMEF14Q5SWL7 426 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 FAM102AQ5T9C2 384 aaPredicted RBP3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 LRRTM3Q86VH5 581 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 ZZZ3Q8IYH5 903 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 SLC44A3Q8N4M1 653 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 LINC00476Q8WZB0 136 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 NAF1Q96HR8 494 aaKnown RBP3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 PRSS50Q9UI38 385 aa3.92□□□□□ -1.78
EFCAB13-212ENST00000523842 MGST3O14880 152 aa3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 ELANEP08246 267 aa3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 LTA4HP09960 611 aaKnown RBP3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 DDX6P26196 483 aaKnown RBP eCLIP3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 MANFP55145 182 aaKnown RBP3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 WNT3AP56704 352 aa3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 CCT2P78371 535 aaKnown RBP3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 GUCY1B3Q02153 619 aa3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 SCAPQ12770 1279 aa3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 TERF2Q15554 542 aa3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 METTL24Q5JXM2 366 aa3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 ZNF362Q5T0B9 420 aaPredicted RBP3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 SIMC1Q8NDZ2 872 aa3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 TFAP2CQ92754 450 aa3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 ZSWIM1Q9BR11 485 aa3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 ORAI3Q9BRQ5 295 aa3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 TARS2Q9BW92 718 aaKnown RBP3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 USP36Q9P275 1121 aaKnown RBP3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 TESQ9UGI8 421 aaKnown RBP3.91□□□□□ -1.78
EFCAB13-212ENST00000523842 PIPSLA2A3N6 862 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 TBKBP1A7MCY6 615 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 MAFGO15525 162 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 ITGAMP11215 1152 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 CTSSP25774 331 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 MPLP40238 635 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 LGALS4P56470 323 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 PDCD1Q15116 288 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 PRR16Q569H4 304 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 BROXQ5VW32 411 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 IQSEC1Q6DN90 963 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 EFCAB12Q6NXP0 572 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 JAZF1Q86VZ6 243 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 ZNF610Q8N9Z0 462 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 FAM98AQ8NCA5 519 aaKnown RBP3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 DCLRE1CQ96SD1 692 aaKnown RBP3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 CDC5LQ99459 802 aaKnown RBP3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 KCTD10Q9H3F6 313 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 MRPL42Q9Y6G3 142 aaKnown RBP3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 PNPLA7Q6ZV29 1317 aa3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 COL11A2P13942 1736 aaPredicted RBP3.9□□□□□ -1.79
EFCAB13-212ENST00000523842 DRGXA6NNA5 263 aa3.89□□□□□ -1.79
EFCAB13-212ENST00000523842 MARCH11A6NNE9 402 aa3.89□□□□□ -1.79
EFCAB13-212ENST00000523842 KDM1AO60341 852 aa3.89□□□□□ -1.79
EFCAB13-212ENST00000523842 PRSS23O95084 383 aa3.89□□□□□ -1.79
EFCAB13-212ENST00000523842 XPAP23025 273 aaPredicted RBP3.89□□□□□ -1.79
EFCAB13-212ENST00000523842 ADSLP30566 484 aaPredicted RBP3.89□□□□□ -1.79
EFCAB13-212ENST00000523842 CXCR5P32302 372 aa3.89□□□□□ -1.79
EFCAB13-212ENST00000523842 IL2P60568 153 aa3.89□□□□□ -1.79
EFCAB13-212ENST00000523842 BMT2Q1RMZ1 405 aa3.89□□□□□ -1.79
EFCAB13-212ENST00000523842 SYCE2Q6PIF2 218 aa3.89□□□□□ -1.79
EFCAB13-212ENST00000523842 GPR149Q86SP6 731 aa3.89□□□□□ -1.79
EFCAB13-212ENST00000523842 PASD1Q8IV76 773 aa3.89□□□□□ -1.79
EFCAB13-212ENST00000523842 CMIPQ8IY22 773 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms