RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 CDH23Q9H251 3354 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 ZMYM2Q9UBW7 1377 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 KIAA1671Q9BY89 1806 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 HIP1RO75146 1068 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 PRKCBP05771 671 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 KRT18P05783 430 aaKnown RBP8.53□□□□□ -1.04
FAM49B-227ENST00000523514 RB1P06400 928 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 DDIT3P35638 169 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 STAT6P42226 847 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 ME1P48163 572 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 NAALADL2Q58DX5 795 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 RRAGBQ5VZM2 374 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 SLC27A1Q6PCB7 646 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 LYPD8Q6UX82 237 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 APBB1IPQ7Z5R6 666 aaPredicted RBP8.53□□□□□ -1.04
FAM49B-227ENST00000523514 ZNF598Q86UK7 904 aaKnown RBP8.53□□□□□ -1.04
FAM49B-227ENST00000523514 GPBP1Q86WP2 473 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 LRRC43Q8N309 656 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 ARNTL2Q8WYA1 636 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 BSNDQ8WZ55 320 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 CLP1Q92989 425 aaKnown RBP8.53□□□□□ -1.04
FAM49B-227ENST00000523514 EPSTI1Q96J88 318 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 CLIC6Q96NY7 704 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 PYM1Q9BRP8 204 aaKnown RBP8.53□□□□□ -1.04
FAM49B-227ENST00000523514 PLVAPQ9BX97 442 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 TRIM6Q9C030 488 aaPredicted RBP8.53□□□□□ -1.04
FAM49B-227ENST00000523514 LRRC27Q9C0I9 530 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 SCAND2PQ9GZW5 306 aaPredicted RBP8.53□□□□□ -1.04
FAM49B-227ENST00000523514 FZD8Q9H461 694 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 CUEDC2Q9H467 287 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 PRDM12Q9H4Q4 367 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 UBN1Q9NPG3 1134 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 KMT5AQ9NQR1 393 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 AAASQ9NRG9 546 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 BLOC1S4Q9NUP1 217 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 PLA2G2EQ9NZK7 142 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 LMCD1Q9NZU5 365 aa8.53□□□□□ -1.04
FAM49B-227ENST00000523514 LARSQ9P2J5 1176 aaKnown RBP8.53□□□□□ -1.04
FAM49B-227ENST00000523514 A0A1B0GUA9 196 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 CCDC169A6NNP5 214 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 TBKBP1A7MCY6 615 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 C5orf67F2Z3F1 127 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 K7ERI5 159 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 ACKR2O00590 384 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 N4BP3O15049 544 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 TBCAO75347 108 aaKnown RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 ARHGEF15O94989 841 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 PLS3P13797 630 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 ARF4P18085 180 aaPredicted RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 NCLP19338 710 aaKnown RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 POU3F3P20264 500 aaPredicted RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 IBSPP21815 317 aaPredicted RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 HOXA11P31270 313 aaPredicted RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 CTNNB1P35222 781 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 ANP32AP39687 249 aaKnown RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 NPTX2P47972 431 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 PEX3P56589 373 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 DNM1Q05193 864 aaKnown RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 MAPK7Q13164 816 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 PRPF4BQ13523 1007 aaKnown RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 FOXD4L6Q3SYB3 417 aaPredicted RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 MSS51Q4VC12 460 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 PAN2Q504Q3 1202 aaKnown RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 EPC2Q52LR7 807 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 TJAP1Q5JTD0 557 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 SPECC1Q5M775 1068 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 GLB1LQ6UWU2 654 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 FOXD4L3Q6VB84 417 aaPredicted RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 SV2BQ7L1I2 683 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 MRPL10Q7Z7H8 261 aaKnown RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 TMEM192Q8IY95 271 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 DAW1Q8N136 415 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 RNF169Q8NCN4 708 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 SLC17A8Q8NDX2 589 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 MYLIPQ8WY64 445 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 P2RX5Q93086 422 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 SPATA32Q96LK8 384 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 ADPGKQ9BRR6 497 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 C17orf80Q9BSJ5 609 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 C11orf84Q9BUA3 381 aaPredicted RBP8.52□□□□□ -1.05
FAM49B-227ENST00000523514 CCDC113Q9H0I3 377 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 MAGEF1Q9HAY2 307 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 PARVGQ9HBI0 331 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 PRDM9Q9NQV7 894 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 FAM13BQ9NYF5 915 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 ARHGAP28Q9P2N2 729 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 RCOR1Q9UKL0 485 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 MTUS1Q9ULD2 1270 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 ZDHHC9Q9Y397 364 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 PCDHB2Q9Y5E7 798 aa8.52□□□□□ -1.05
FAM49B-227ENST00000523514 H3BNC9 293 aa8.51□□□□□ -1.05
FAM49B-227ENST00000523514 FAM13AO94988 1023 aa8.51□□□□□ -1.05
FAM49B-227ENST00000523514 FGFR1P11362 822 aa8.51□□□□□ -1.05
FAM49B-227ENST00000523514 ITGA4P13612 1032 aa8.51□□□□□ -1.05
FAM49B-227ENST00000523514 JUNDP17535 347 aa8.51□□□□□ -1.05
FAM49B-227ENST00000523514 ATF7P17544 494 aaPredicted RBP8.51□□□□□ -1.05
FAM49B-227ENST00000523514 LAG3P18627 525 aa8.51□□□□□ -1.05
FAM49B-227ENST00000523514 PPM1AP35813 382 aa8.51□□□□□ -1.05
FAM49B-227ENST00000523514 BMPR1AP36894 532 aa8.51□□□□□ -1.05
FAM49B-227ENST00000523514 ZNF131P52739 623 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms