RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 OTUD6AQ7L8S5 288 aa25.33■■□□□ 1.65
PVT1-218ENST00000523328 PALB2Q86YC2 1186 aa25.33■■□□□ 1.65
PVT1-218ENST00000523328 IFNLR1Q8IU57 520 aaPredicted RBP25.33■■□□□ 1.65
PVT1-218ENST00000523328 GSTCDQ8NEC7 633 aa25.33■■□□□ 1.65
PVT1-218ENST00000523328 GPR152Q8TDT2 470 aa25.33■■□□□ 1.65
PVT1-218ENST00000523328 MTRQ99707 1265 aa25.33■■□□□ 1.65
PVT1-218ENST00000523328 PHF20Q9BVI0 1012 aa25.33■■□□□ 1.65
PVT1-218ENST00000523328 GPR62Q9BZJ7 368 aa25.33■■□□□ 1.65
PVT1-218ENST00000523328 SEMA4AQ9H3S1 761 aa25.33■■□□□ 1.65
PVT1-218ENST00000523328 CACNA1IQ9P0X4 2223 aa25.33■■□□□ 1.65
PVT1-218ENST00000523328 CCDC194A0A1B0GVG4 234 aa25.32■■□□□ 1.64
PVT1-218ENST00000523328 LAMP2P13473 410 aa25.32■■□□□ 1.64
PVT1-218ENST00000523328 AMHR2Q16671 573 aa25.32■■□□□ 1.64
PVT1-218ENST00000523328 LILRA6Q6PI73 481 aa25.32■■□□□ 1.64
PVT1-218ENST00000523328 GPR65Q8IYL9 337 aa25.32■■□□□ 1.64
PVT1-218ENST00000523328 DYDC2Q96IM9 177 aa25.32■■□□□ 1.64
PVT1-218ENST00000523328 ZDHHC7Q9NXF8 308 aa25.32■■□□□ 1.64
PVT1-218ENST00000523328 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.32■■□□□ 1.646e-7■■■■□ 24.2
PVT1-218ENST00000523328 DLGAP2Q9P1A6 1054 aa25.32■■□□□ 1.64
PVT1-218ENST00000523328 GIT1Q9Y2X7 761 aa25.32■■□□□ 1.64
PVT1-218ENST00000523328 OTOGLQ3ZCN5 2332 aa25.31■■□□□ 1.64
PVT1-218ENST00000523328 ANHXE9PGG2 379 aa25.31■■□□□ 1.64
PVT1-218ENST00000523328 CCNT1O60563 726 aaKnown RBP25.31■■□□□ 1.64
PVT1-218ENST00000523328 LMNAP02545 664 aaKnown RBP25.31■■□□□ 1.64
PVT1-218ENST00000523328 STK3Q13188 491 aa25.31■■□□□ 1.64
PVT1-218ENST00000523328 CTTNQ14247 550 aaKnown RBP25.31■■□□□ 1.64
PVT1-218ENST00000523328 MXD4Q14582 209 aaPredicted RBP25.31■■□□□ 1.64
PVT1-218ENST00000523328 PHLDB3Q6NSJ2 640 aa25.31■■□□□ 1.64
PVT1-218ENST00000523328 FUT10Q6P4F1 479 aa25.31■■□□□ 1.64
PVT1-218ENST00000523328 COLEC11Q9BWP8 271 aa25.31■■□□□ 1.64
PVT1-218ENST00000523328 PRKD2Q9BZL6 878 aa25.31■■□□□ 1.64
PVT1-218ENST00000523328 NXF3Q9H4D5 531 aaKnown RBP25.31■■□□□ 1.64
PVT1-218ENST00000523328 ZSWIM4Q9H7M6 989 aa25.31■■□□□ 1.64
PVT1-218ENST00000523328 PIDD1Q9HB75 910 aa25.31■■□□□ 1.64
PVT1-218ENST00000523328 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.31■■□□□ 1.64
PVT1-218ENST00000523328 FNIP2Q9P278 1114 aa25.31■■□□□ 1.64
PVT1-218ENST00000523328 R4GN57 208 aa25.31■■□□□ 1.64
PVT1-218ENST00000523328 MYH15Q9Y2K3 1946 aa25.31■■□□□ 1.64
PVT1-218ENST00000523328 INO80B-WBP1J3KQ70 363 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 NR1I2O75469 434 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 REC8O95072 547 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 ARF4P18085 180 aaPredicted RBP25.3■■□□□ 1.64
PVT1-218ENST00000523328 RFX1P22670 979 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 CYP4A11Q02928 519 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 MBTD1Q05BQ5 628 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 POU5F1BQ06416 359 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 HTR4Q13639 388 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 USP41Q3LFD5 358 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 NCAPH2Q6IBW4 605 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 GET4Q7L5D6 327 aaPredicted RBP25.3■■□□□ 1.64
PVT1-218ENST00000523328 POTEDQ86YR6 584 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 GLYCTKQ8IVS8 523 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 KCNG4Q8TDN1 519 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 RIN2Q8WYP3 895 aaPredicted RBP25.3■■□□□ 1.64
PVT1-218ENST00000523328 APOL6Q9BWW8 343 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 ARHGEF3Q9NR81 526 aa25.3■■□□□ 1.64
PVT1-218ENST00000523328 DCNP07585 359 aaKnown RBP25.29■■□□□ 1.64
PVT1-218ENST00000523328 NCBP1Q09161 790 aaKnown RBP25.29■■□□□ 1.64
PVT1-218ENST00000523328 CAPSQ13938 189 aa25.29■■□□□ 1.64
PVT1-218ENST00000523328 CPLX2Q6PUV4 134 aaKnown RBP25.29■■□□□ 1.64
PVT1-218ENST00000523328 OXER1Q8TDS5 423 aa25.29■■□□□ 1.64
PVT1-218ENST00000523328 ASAP3Q8TDY4 903 aa25.29■■□□□ 1.64
PVT1-218ENST00000523328 SLC2A4RGQ9NR83 387 aa25.29■■□□□ 1.64
PVT1-218ENST00000523328 ADAM28Q9UKQ2 775 aa25.29■■□□□ 1.64
PVT1-218ENST00000523328 CYP46A1Q9Y6A2 500 aa25.29■■□□□ 1.64
PVT1-218ENST00000523328 DNAH14Q0VDD8 3507 aa25.28■■□□□ 1.64
PVT1-218ENST00000523328 MIA3Q5JRA6 1907 aa25.28■■□□□ 1.64
PVT1-218ENST00000523328 FRYLO94915 3013 aa25.28■■□□□ 1.64
PVT1-218ENST00000523328 SLITRK3O94933 977 aa25.28■■□□□ 1.64
PVT1-218ENST00000523328 RPL17P18621 184 aaKnown RBP25.28■■□□□ 1.64
PVT1-218ENST00000523328 AKAP5P24588 427 aa25.28■■□□□ 1.64
PVT1-218ENST00000523328 TFDP1Q14186 410 aa25.28■■□□□ 1.64
PVT1-218ENST00000523328 SPECC1Q5M775 1068 aa25.28■■□□□ 1.64
PVT1-218ENST00000523328 PIK3AP1Q6ZUJ8 805 aa25.28■■□□□ 1.64
PVT1-218ENST00000523328 TRIM6Q9C030 488 aaPredicted RBP25.28■■□□□ 1.64
PVT1-218ENST00000523328 GJB4Q9NTQ9 266 aa25.28■■□□□ 1.64
PVT1-218ENST00000523328 SIT1Q9Y3P8 196 aa25.28■■□□□ 1.64
PVT1-218ENST00000523328 NUMBLQ9Y6R0 609 aa25.28■■□□□ 1.64
PVT1-218ENST00000523328 ZMYND10O75800 440 aa25.27■■□□□ 1.64
PVT1-218ENST00000523328 ARL2P36404 184 aa25.27■■□□□ 1.64
PVT1-218ENST00000523328 GRIK3Q13003 919 aa25.27■■□□□ 1.64
PVT1-218ENST00000523328 EARS2Q5JPH6 523 aaKnown RBP25.27■■□□□ 1.64
PVT1-218ENST00000523328 TPH2Q8IWU9 490 aa25.27■■□□□ 1.64
PVT1-218ENST00000523328 ST13P5Q8NFI4 369 aaPredicted RBP25.27■■□□□ 1.64
PVT1-218ENST00000523328 RABGGTAQ92696 567 aa25.27■■□□□ 1.64
PVT1-218ENST00000523328 RMDN1Q96DB5 314 aa25.27■■□□□ 1.64
PVT1-218ENST00000523328 NAP1L4Q99733 375 aaKnown RBP25.27■■□□□ 1.64
PVT1-218ENST00000523328 NFKBIZQ9BYH8 718 aa25.27■■□□□ 1.64
PVT1-218ENST00000523328 ZMYM2Q9UBW7 1377 aa25.27■■□□□ 1.64
PVT1-218ENST00000523328 B4GALT5O43286 388 aa25.26■■□□□ 1.63
PVT1-218ENST00000523328 MARCH6O60337 910 aa25.26■■□□□ 1.63
PVT1-218ENST00000523328 DCLRE1AQ6PJP8 1040 aa25.26■■□□□ 1.63
PVT1-218ENST00000523328 CDR2LQ86X02 465 aaPredicted RBP25.26■■□□□ 1.63
PVT1-218ENST00000523328 SLFN12Q8IYM2 578 aa25.26■■□□□ 1.63
PVT1-218ENST00000523328 HACE1Q8IYU2 909 aa25.26■■□□□ 1.63
PVT1-218ENST00000523328 RPP25Q9BUL9 199 aaKnown RBP25.26■■□□□ 1.63
PVT1-218ENST00000523328 CACNG4Q9UBN1 327 aa25.26■■□□□ 1.63
PVT1-218ENST00000523328 CEP250Q9BV73 2442 aa25.25■■□□□ 1.63
PVT1-218ENST00000523328 LYPLA2O95372 231 aa25.25■■□□□ 1.63
PVT1-218ENST00000523328 SP9P0CG40 484 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms