RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	MAST3	O60307	1309 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CFAP69	A5D8W1	941 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ANKRD62	A6NC57	917 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	PDE2A	O00408	941 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	NOP56	O00567	594 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	TCEA3	O75764	348 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZFY	P08048	801 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	GLI1	P08151	1106 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	NUDT1	P36639	197 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	SERPINB4	P48594	390 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ATP1A2	P50993	1020 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	RAP1GDS1	P52306	607 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ADK	P55263	362 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	C2orf54	Q08AI8	447 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	MAP3K21	Q5TCX8	1036 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	SLX4IP	Q5VYV7	408 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	TSHZ3	Q63HK5	1081 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	SIGIRR	Q6IA17	410 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	GRAMD2A	Q8IUY3	354 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	MAGEB6	Q8N7X4	407 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	UTP4	Q969X6	686 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	FERMT2	Q96AC1	680 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	KLHL29	Q96CT2	875 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CALML4	Q96GE6	196 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CEP19	Q96LK0	163 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF641	Q96N77	438 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	BTBD9	Q96Q07	612 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	PYM1	Q9BRP8	204 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	AIFM2	Q9BRQ8	373 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	DESI2	Q9BSY9	194 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF341	Q9BYN7	854 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	IL25	Q9H293	177 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF696	Q9H7X3	374 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	SPON1	Q9HCB6	807 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	C6orf50	Q9HD87	102 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	HOMER2	Q9NSB8	354 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	FBXO9	Q9UK97	447 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	PA2G4	Q9UQ80	394 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	PRELID1	Q9Y255	219 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	STARD13	Q9Y3M8	1113 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	VILL	O15195	856 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	PFDN6	O15212	129 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	DENR	O43583	198 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	TAF5L	O75529	589 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	TOMM70	O94826	608 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	UBOX5	O94941	541 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CSPG5	O95196	566 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ITGA6	P23229	1130 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	TBXAS1	P24557	533 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	LONP1	P36776	959 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	UBA7	P41226	1012 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	YARS	P54577	528 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	NAPA	P54920	295 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	EN1	Q05925	392 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CDK18	Q07002	472 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	STK4	Q13043	487 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	RASA2	Q15283	850 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	PPP2R5E	Q16537	467 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CFAP221	Q4G0U5	840 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	DALRD3	Q5D0E6	543 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	C8orf74	Q6P047	294 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	FOXR2	Q6PJQ5	311 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	GADL1	Q6ZQY3	521 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	LZTR1	Q8N653	840 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	NCOA7	Q8NI08	942 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CHPT1	Q8WUD6	406 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CASKIN2	Q8WXE0	1202 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	USP6NL	Q92738	828 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	SEC62	Q99442	399 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	MAP3K14	Q99558	947 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	TSG101	Q99816	390 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	SLC26A6	Q9BXS9	759 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF180	Q9UJW8	692 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	ERVK-11	Q9UQG0	969 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	CHMP2B	Q9UQN3	213 aa		4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	DIS3	Q9Y2L1	958 aa	Known RBP	4.11	□□□□□ -1.75
FAM49B-225	ENST00000523288	RGPD8	O14715	1765 aa	Predicted RBP	4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	RGPD5	Q99666	1765 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	TMEM2	Q9UHN6	1383 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	LOC102724428	A0A0B4J2F2	783 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	PTPDC1	A2A3K4	754 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	FBP2	O00757	339 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	HAT1	O14929	419 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	BET1	O15155	118 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	ACOX3	O15254	700 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	CNOT3	O75175	753 aa	Known RBP	4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	RSL1D1	O76021	490 aa	Known RBP	4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	FARP2	O94887	1054 aa	Predicted RBP	4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	KLHL2	O95198	593 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	STAMBP	O95630	424 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	IL1B	P01584	269 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	NAT2	P11245	290 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	NAGA	P17050	411 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	HOXD11	P31277	338 aa	Predicted RBP	4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	HSPA1L	P34931	641 aa		4.1	□□□□□ -1.75
FAM49B-225	ENST00000523288	SERPINB6	P35237	376 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms