RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 TOPORSQ9NS56 1045 aaPredicted RBP7.32□□□□□ -1.24
PVT1-217ENST00000523190 FAM207AQ9NSI2 230 aaPredicted RBP7.32□□□□□ -1.24
PVT1-217ENST00000523190 PRMT7Q9NVM4 692 aaPredicted RBP7.32□□□□□ -1.24
PVT1-217ENST00000523190 GTF2IRD1Q9UHL9 959 aa7.32□□□□□ -1.24
PVT1-217ENST00000523190 AGO2Q9UKV8 859 aaKnown RBP7.32□□□□□ -1.24
PVT1-217ENST00000523190 GINS2Q9Y248 185 aa7.32□□□□□ -1.24
PVT1-217ENST00000523190 STYXL1Q9Y6J8 313 aa7.32□□□□□ -1.24
PVT1-217ENST00000523190 EVPLQ92817 2033 aa7.32□□□□□ -1.24
PVT1-217ENST00000523190 FRMPD3Q5JV73 1810 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 CNTNAP2Q9UHC6 1331 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 A0A0B4J269 797 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 TTC26A0AVF1 554 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 LRRIQ3A6PVS8 624 aaPredicted RBP7.31□□□□□ -1.24
PVT1-217ENST00000523190 ESPNB1AK53 854 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 ACKR2O00590 384 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 ABLIM1O14639 778 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 KIAA0391O15091 583 aaKnown RBP7.31□□□□□ -1.24
PVT1-217ENST00000523190 EXTL3O43909 919 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 GPR32O75388 356 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 TOM1L1O75674 476 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 MYCP01106 439 aaPredicted RBP7.31□□□□□ -1.24
PVT1-217ENST00000523190 IQCF3P0C7M6 154 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 GNAT1P11488 350 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 SKILP12757 684 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 MSNP26038 577 aaKnown RBP7.31□□□□□ -1.24
PVT1-217ENST00000523190 KRT9P35527 623 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 ACOT2P49753 483 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 WNT7BP56706 349 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 APBA1Q02410 837 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 CYP24A1Q07973 514 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 NOLC1Q14978 699 aaKnown RBP eCLIP7.31□□□□□ -1.24
PVT1-217ENST00000523190 AMHR2Q16671 573 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 FAM187BQ17R55 369 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 ZNF568Q3ZCX4 644 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 CBWD6Q4V339 395 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 SEZ6Q53EL9 994 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 CBWD3Q5JTY5 395 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 CBWD5Q5RIA9 395 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 C1orf220Q5T0J3 134 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 GDF6Q6KF10 455 aaPredicted RBP7.31□□□□□ -1.24
PVT1-217ENST00000523190 MPZL3Q6UWV2 235 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 GBP6Q6ZN66 633 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 SRGAP1Q7Z6B7 1085 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 RNF180Q86T96 592 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 TMEM139Q8IV31 216 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 CNGA4Q8IV77 575 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 PCSK9Q8NBP7 692 aaKnown RBP7.31□□□□□ -1.24
PVT1-217ENST00000523190 NEK11Q8NG66 645 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 PARD3BQ8TEW8 1205 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 CCDC127Q96BQ5 260 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 CPB2Q96IY4 423 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 OSMRQ99650 979 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 TCHPQ9BT92 498 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 NUP58Q9BVL2 599 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 GCOM2Q9BZD3 368 aaPredicted RBP7.31□□□□□ -1.24
PVT1-217ENST00000523190 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.31□□□□□ -1.243e-6■■□□□ 13.5
PVT1-217ENST00000523190 GANQ9H2C0 597 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 ADAMTS10Q9H324 1103 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 CDHR5Q9HBB8 845 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 WBP1LQ9NX94 342 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 GCNT4Q9P109 453 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 CAPN11Q9UMQ6 739 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 PTPN22Q9Y2R2 807 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 SCN10AQ9Y5Y9 1956 aa7.31□□□□□ -1.24
PVT1-217ENST00000523190 GRIN2DO15399 1336 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 A0A1W2PQJ5 194 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 ZNF233A6NK53 670 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 OGTO15294 1046 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 CLDN3O15551 220 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 NRDCO43847 1150 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 TSPAN1O60635 241 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 N4BP1O75113 896 aaKnown RBP7.3□□□□□ -1.24
PVT1-217ENST00000523190 ERLIN2O94905 339 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 LDHAP00338 332 aaKnown RBP7.3□□□□□ -1.24
PVT1-217ENST00000523190 DLATP10515 647 aaKnown RBP7.3□□□□□ -1.24
PVT1-217ENST00000523190 ACTN1P12814 892 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 ARF4P18085 180 aaPredicted RBP7.3□□□□□ -1.24
PVT1-217ENST00000523190 SLC9A1P19634 815 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 PROZP22891 400 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 PON1P27169 355 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 TNFSF9P41273 254 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 GCLMP48507 274 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 MXI1P50539 228 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 ACLYP53396 1101 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 MCL1Q07820 350 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 PPP3CAQ08209 521 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 EXOC3L4Q17RC7 722 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 FIGNQ5HY92 759 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 LMBRD2Q68DH5 695 aaPredicted RBP7.3□□□□□ -1.24
PVT1-217ENST00000523190 LHX8Q68G74 356 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 CRELD2Q6UXH1 353 aaPredicted RBP7.3□□□□□ -1.24
PVT1-217ENST00000523190 TSHZ1Q6ZSZ6 1077 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 SESTD1Q86VW0 696 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 BRSK2Q8IWQ3 736 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 THNSL1Q8IYQ7 743 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 C17orf53Q8N3J3 647 aaPredicted RBP7.3□□□□□ -1.24
PVT1-217ENST00000523190 CEP120Q8N960 986 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 CCDC112Q8NEF3 446 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 TMC2Q8TDI7 906 aa7.3□□□□□ -1.24
PVT1-217ENST00000523190 UBE2Q2Q8WVN8 375 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms