RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 ZCCHC8Q6NZY4 707 aaKnown RBP4.15□□□□□ -1.75
PCM1-217ENST00000522998 MSL3Q8N5Y2 521 aaKnown RBP4.15□□□□□ -1.75
PCM1-217ENST00000522998 CDYL2Q8N8U2 506 aa4.15□□□□□ -1.75
PCM1-217ENST00000522998 Q96MF0 132 aa4.15□□□□□ -1.75
PCM1-217ENST00000522998 ELF4Q99607 663 aaPredicted RBP4.15□□□□□ -1.75
PCM1-217ENST00000522998 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.15□□□□□ -1.75
PCM1-217ENST00000522998 PCDHB6Q9Y5E3 794 aa4.15□□□□□ -1.75
PCM1-217ENST00000522998 MYPNQ86TC9 1320 aa4.15□□□□□ -1.75
PCM1-217ENST00000522998 PROP1O75360 226 aa4.14□□□□□ -1.75
PCM1-217ENST00000522998 CFIP05156 583 aa4.14□□□□□ -1.75
PCM1-217ENST00000522998 CLEC2LP0C7M8 214 aa4.14□□□□□ -1.75
PCM1-217ENST00000522998 HOXB6P17509 224 aaKnown RBP4.14□□□□□ -1.75
PCM1-217ENST00000522998 SCAPQ12770 1279 aa4.14□□□□□ -1.75
PCM1-217ENST00000522998 ANKS6Q68DC2 871 aa4.14□□□□□ -1.75
PCM1-217ENST00000522998 Q6ZNX1 250 aa4.14□□□□□ -1.75
PCM1-217ENST00000522998 SH2D3CQ8N5H7 860 aa4.14□□□□□ -1.75
PCM1-217ENST00000522998 RNF169Q8NCN4 708 aa4.14□□□□□ -1.75
PCM1-217ENST00000522998 RTF1Q92541 710 aaKnown RBP4.14□□□□□ -1.75
PCM1-217ENST00000522998 TFAP2CQ92754 450 aa4.14□□□□□ -1.75
PCM1-217ENST00000522998 SETD1BQ9UPS6 1966 aaKnown RBP4.13□□□□□ -1.75
PCM1-217ENST00000522998 CCDC163A0A0D9SF12 145 aa4.13□□□□□ -1.75
PCM1-217ENST00000522998 CGB1A6NKQ9 187 aa4.13□□□□□ -1.75
PCM1-217ENST00000522998 RGS19P49795 217 aa4.13□□□□□ -1.75
PCM1-217ENST00000522998 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
PCM1-217ENST00000522998 SPDYE7PQ495Y7 208 aa4.13□□□□□ -1.75
PCM1-217ENST00000522998 GPR149Q86SP6 731 aa4.13□□□□□ -1.75
PCM1-217ENST00000522998 ZZZ3Q8IYH5 903 aa4.13□□□□□ -1.75
PCM1-217ENST00000522998 FERMT2Q96AC1 680 aa4.13□□□□□ -1.75
PCM1-217ENST00000522998 CDC5LQ99459 802 aaKnown RBP4.13□□□□□ -1.75
PCM1-217ENST00000522998 ALOXE3Q9BYJ1 711 aa4.13□□□□□ -1.75
PCM1-217ENST00000522998 KLK15Q9H2R5 256 aa4.13□□□□□ -1.75
PCM1-217ENST00000522998 TOMM22Q9NS69 142 aa4.13□□□□□ -1.75
PCM1-217ENST00000522998 SIRPGQ9P1W8 387 aa4.13□□□□□ -1.75
PCM1-217ENST00000522998 LRIT1Q9P2V4 623 aa4.13□□□□□ -1.75
PCM1-217ENST00000522998 ZNF70Q9UC06 446 aaPredicted RBP4.13□□□□□ -1.75
PCM1-217ENST00000522998 PPP1R1BQ9UD71 204 aaPredicted RBP4.13□□□□□ -1.75
PCM1-217ENST00000522998 TBKBP1A7MCY6 615 aa4.12□□□□□ -1.75
PCM1-217ENST00000522998 SEC24DO94855 1032 aaPredicted RBP4.12□□□□□ -1.75
PCM1-217ENST00000522998 XPAP23025 273 aaPredicted RBP4.12□□□□□ -1.75
PCM1-217ENST00000522998 IGFALSP35858 605 aa4.12□□□□□ -1.75
PCM1-217ENST00000522998 MRPS35P82673 323 aaKnown RBP4.12□□□□□ -1.75
PCM1-217ENST00000522998 GPR162Q16538 588 aa4.12□□□□□ -1.75
PCM1-217ENST00000522998 METRNLQ641Q3 311 aa4.12□□□□□ -1.75
PCM1-217ENST00000522998 ZSWIM2Q8NEG5 633 aa4.12□□□□□ -1.75
PCM1-217ENST00000522998 NEU1Q99519 415 aa4.12□□□□□ -1.75
PCM1-217ENST00000522998 FDXACB1Q9BRP7 624 aaPredicted RBP4.12□□□□□ -1.75
PCM1-217ENST00000522998 MTFR1LQ9H019 292 aa4.12□□□□□ -1.75
PCM1-217ENST00000522998 FOXJ2Q9P0K8 574 aa4.12□□□□□ -1.75
PCM1-217ENST00000522998 SLC17A6Q9P2U8 582 aa4.12□□□□□ -1.75
PCM1-217ENST00000522998 USP18Q9UMW8 372 aa4.12□□□□□ -1.75
PCM1-217ENST00000522998 ATP11BQ9Y2G3 1177 aa4.12□□□□□ -1.75
PCM1-217ENST00000522998 SPO11Q9Y5K1 396 aa4.12□□□□□ -1.75
PCM1-217ENST00000522998 ZMYM3Q14202 1370 aa4.12□□□□□ -1.75
PCM1-217ENST00000522998 ST20-MTHFSA0A0A6YYL1 179 aa4.11□□□□□ -1.75
PCM1-217ENST00000522998 A0A1W2PR48 441 aa4.11□□□□□ -1.75
PCM1-217ENST00000522998 WDR91A4D1P6 747 aa4.11□□□□□ -1.75
PCM1-217ENST00000522998 NRP2O60462 931 aa4.11□□□□□ -1.75
PCM1-217ENST00000522998 POU3F3P20264 500 aaPredicted RBP4.11□□□□□ -1.75
PCM1-217ENST00000522998 BMT2Q1RMZ1 405 aa4.11□□□□□ -1.75
PCM1-217ENST00000522998 ZNF425Q6IV72 752 aa4.11□□□□□ -1.75
PCM1-217ENST00000522998 LMBR1LQ6UX01 489 aa4.11□□□□□ -1.75
PCM1-217ENST00000522998 ACTRT2Q8TDY3 377 aa4.11□□□□□ -1.75
PCM1-217ENST00000522998 NCOA5Q9HCD5 579 aaKnown RBP4.11□□□□□ -1.75
PCM1-217ENST00000522998 B4GALT6Q9UBX8 382 aa4.11□□□□□ -1.75
PCM1-217ENST00000522998 NOX1Q9Y5S8 564 aa4.11□□□□□ -1.75
PCM1-217ENST00000522998 ELL2O00472 640 aaPredicted RBP4.1□□□□□ -1.75
PCM1-217ENST00000522998 CHN2P52757 468 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 NRG3P56975 720 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 OCA2Q04671 838 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 MGAT5Q09328 741 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 UBE3CQ15386 1083 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 AGAP9Q5VTM2 703 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 ZNF788Q6ZQV5 615 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 MAPKAPK5Q8IW41 473 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 OR56A1Q8NGH5 318 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 ZFP28Q8NHY6 868 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 GAB3Q8WWW8 586 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 ZNF428Q96B54 188 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 PDLIM2Q96JY6 352 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 CASS4Q9NQ75 786 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 TBCCD1Q9NVR7 557 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 ASB6Q9NWX5 421 aa4.1□□□□□ -1.75
PCM1-217ENST00000522998 OPA1O60313 960 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 ASLP04424 464 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 PFKMP08237 780 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 CD40P25942 277 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 GPR15P49685 360 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 PROK1P58294 105 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 CCDC178Q5BJE1 867 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 AKNAD1Q5T1N1 836 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 CREB3L3Q68CJ9 461 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 ESPNLQ6ZVH7 1005 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 RHOT2Q8IXI1 618 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 TMEM132CQ8N3T6 1108 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 PHACTR3Q96KR7 559 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 DEPDC7Q96QD5 511 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 HEPHQ9BQS7 1158 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 ZMAT4Q9H898 229 aa4.09□□□□□ -1.75
PCM1-217ENST00000522998 ARPP21Q9UBL0 812 aaPredicted RBP4.09□□□□□ -1.75
PCM1-217ENST00000522998 FAM221BA6H8Z2 402 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms