RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 DDX12PQ92771 950 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 ZNF668Q96K58 619 aaPredicted RBP10.39□□□□□ -0.75
CLK4-209ENST00000521621 SPATA32Q96LK8 384 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 NSUN3Q9H649 340 aaKnown RBP10.39□□□□□ -0.75
CLK4-209ENST00000521621 ARL5CA6NH57 179 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 ITGB1P05556 798 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 SLFN14P0C7P3 912 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 NAB2Q15742 525 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 SLFN12LQ6IEE8 588 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 FAM117BQ6P1L5 589 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 TMEM87AQ8NBN3 555 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 GSTCDQ8NEC7 633 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 RASSF8Q8NHQ8 419 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 CPB2Q96IY4 423 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 NGRNQ9NPE2 291 aaKnown RBP10.38□□□□□ -0.75
CLK4-209ENST00000521621 CNTN3Q9P232 1028 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 CGNQ9P2M7 1197 aaKnown RBP10.38□□□□□ -0.75
CLK4-209ENST00000521621 SSX2IPQ9Y2D8 614 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 DERAQ9Y315 318 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 CCDC169A6NNP5 214 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 NPTXRO95502 500 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 BMT2Q1RMZ1 405 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 PUS10Q3MIT2 529 aaKnown RBP10.38□□□□□ -0.75
CLK4-209ENST00000521621 L1TD1Q5T7N2 865 aaKnown RBP10.38□□□□□ -0.75
CLK4-209ENST00000521621 CLEC17AQ6ZS10 378 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 CCDC65Q8IXS2 484 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 ATXN2LQ8WWM7 1075 aaKnown RBP10.38□□□□□ -0.75
CLK4-209ENST00000521621 TRIM9Q9C026 710 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 CDT1Q9H211 546 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 NRDE2Q9H7Z3 1164 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 EXOC7Q9UPT5 735 aa10.38□□□□□ -0.75
CLK4-209ENST00000521621 SLC16A4O15374 487 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 FAM189A1O60320 539 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 FGF18O76093 207 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 GALTP07902 379 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 CYP3A5P20815 502 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 ME1P48163 572 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 GATMP50440 423 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 BCAR1P56945 870 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 CEBPZQ03701 1054 aaKnown RBP10.37□□□□□ -0.75
CLK4-209ENST00000521621 KRT17Q04695 432 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 PSMD2Q13200 908 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 CAMK1Q14012 370 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 STXBP4Q6ZWJ1 553 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 MAEAQ7L5Y9 396 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 EPM2AIP1Q7L775 607 aaPredicted RBP10.37□□□□□ -0.75
CLK4-209ENST00000521621 MICALL1Q8N3F8 863 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 MYCT1Q8N699 235 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 KLHL23Q8NBE8 558 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 HERC2P3Q9BVR0 1158 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 RHOBTB2Q9BYZ6 727 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 GTPBP4Q9BZE4 634 aaKnown RBP10.37□□□□□ -0.75
CLK4-209ENST00000521621 KCNH3Q9ULD8 1083 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 PCDHB13Q9Y5F0 798 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 ACTN4O43707 911 aaKnown RBP10.37□□□□□ -0.75
CLK4-209ENST00000521621 MCCD1P59942 119 aaPredicted RBP10.37□□□□□ -0.75
CLK4-209ENST00000521621 POSTNQ15063 836 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 CTC1Q2NKJ3 1217 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 UNC13DQ70J99 1090 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 NT5DC4Q86YG4 428 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 FAM178BQ8IXR5 827 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 PPP2R3CQ969Q6 453 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 IGSF21Q96ID5 467 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 PPP1R10Q96QC0 940 aaKnown RBP10.37□□□□□ -0.75
CLK4-209ENST00000521621 TRIM6Q9C030 488 aaPredicted RBP10.37□□□□□ -0.75
CLK4-209ENST00000521621 TMEM206Q9H813 350 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 TOPORSQ9NS56 1045 aaPredicted RBP10.37□□□□□ -0.75
CLK4-209ENST00000521621 SLC38A7Q9NVC3 462 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 A0A0B4J269 797 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 NPHP3-ACAD11A0A0J9YXS1 232 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 TTLL13PA6NNM8 815 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 SSBP05455 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
CLK4-209ENST00000521621 KRT18P05783 430 aaKnown RBP10.37□□□□□ -0.75
CLK4-209ENST00000521621 GARTP22102 1010 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 CREMQ03060 361 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 EEF1DP3Q658K8 133 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 KANK3Q6NY19 840 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 GDPD5Q8WTR4 605 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 SNX27Q96L92 541 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 TIGD1Q96MW7 591 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 PLIN2Q99541 437 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 CCDC94Q9BW85 323 aaPredicted RBP10.37□□□□□ -0.75
CLK4-209ENST00000521621 NXF3Q9H4D5 531 aaKnown RBP10.37□□□□□ -0.75
CLK4-209ENST00000521621 TLR9Q9NR96 1032 aa10.37□□□□□ -0.75
CLK4-209ENST00000521621 PUF60Q9UHX1 559 aaKnown RBP10.37□□□□□ -0.75
CLK4-209ENST00000521621 GRM6O15303 877 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 NR1I2O75469 434 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 CLTAP09496 248 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 ALDH7A1P49419 539 aaKnown RBP10.36□□□□□ -0.75
CLK4-209ENST00000521621 TUSC3Q13454 348 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 KCNC3Q14003 757 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 NOLC1Q14978 699 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLK4-209ENST00000521621 SPECC1Q5M775 1068 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 C12orf56Q8IXR9 622 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 ZNF507Q8TCN5 953 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 HDAC7Q8WUI4 952 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 PABPC5Q96DU9 382 aaKnown RBP10.36□□□□□ -0.75
CLK4-209ENST00000521621 DDX27Q96GQ7 796 aaKnown RBP10.36□□□□□ -0.75
CLK4-209ENST00000521621 ACCSQ96QU6 501 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 COLEC11Q9BWP8 271 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms