RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 GAGE13Q4V321 117 aa8.45□□□□□ -1.06
NUDCD1-204ENST00000521439 ANKRD53Q8N9V6 530 aa8.45□□□□□ -1.06
NUDCD1-204ENST00000521439 OR14K1Q8NGZ2 314 aa8.45□□□□□ -1.06
NUDCD1-204ENST00000521439 TEPSINQ96N21 525 aa8.45□□□□□ -1.06
NUDCD1-204ENST00000521439 ACO2Q99798 780 aaKnown RBP8.45□□□□□ -1.06
NUDCD1-204ENST00000521439 BCO1Q9HAY6 547 aa8.45□□□□□ -1.06
NUDCD1-204ENST00000521439 NR2E1Q9Y466 385 aa8.45□□□□□ -1.06
NUDCD1-204ENST00000521439 SLC4A7Q9Y6M7 1214 aa8.45□□□□□ -1.06
NUDCD1-204ENST00000521439 B4GALT4O60513 344 aa8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 GASTP01350 101 aa8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 RPLP2P05387 115 aaKnown RBP8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 SLC6A9P48067 706 aa8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 PER3P56645 1201 aa8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 RNF151Q2KHN1 245 aa8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 KRT40Q6A162 431 aa8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 CCSAPQ6IQ19 270 aaPredicted RBP8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 RHOT1Q8IXI2 618 aa8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 OR7D4Q8NG98 312 aa8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 KAT5Q92993 513 aa8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 MANSC1Q9H8J5 431 aa8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 GPRC5DQ9NZD1 345 aa8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 TRPS1Q9UHF7 1281 aa8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 SIK3Q9Y2K2 1263 aa8.44□□□□□ -1.06
NUDCD1-204ENST00000521439 SGTAO43765 313 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 B4GALT3O60512 393 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 GYPEP15421 78 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 CRHR1P34998 444 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 DSC2Q02487 901 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 DUSP2Q05923 314 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 GRM3Q14832 879 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 ACAP1Q15027 740 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 LCE1DQ5T752 114 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 BORAQ6PGQ7 559 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 SLC4A10Q6U841 1118 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 TTC7BQ86TV6 843 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 CCDC146Q8IYE0 955 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 LILRA3Q8N6C8 439 aaPredicted RBP8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 CYFIP2Q96F07 1278 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 RPL10LQ96L21 214 aaKnown RBP8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 FAM193BQ96PV7 902 aaPredicted RBP8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 DDX20Q9UHI6 824 aaKnown RBP8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 PCDHB1Q9Y5F3 818 aa8.43□□□□□ -1.06
NUDCD1-204ENST00000521439 CCDC194A0A1B0GVG4 234 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 H3BML4 177 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 NRP1O14786 923 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 ITGA10O75578 1167 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 KRT18P05783 430 aaKnown RBP8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 SREBF1P36956 1147 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 ADAM8P78325 824 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 DENND1CQ8IV53 801 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 DRC7Q8IY82 874 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 PQLC1Q8N2U9 271 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 CAMKK1Q8N5S9 505 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 ZBTB34Q8NCN2 500 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 RABGGTAQ92696 567 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 UHRF1Q96T88 793 aaPredicted RBP8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 ADAM7Q9H2U9 754 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 TDP1Q9NUW8 608 aa8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 PUF60Q9UHX1 559 aaKnown RBP8.42□□□□□ -1.06
NUDCD1-204ENST00000521439 FRMPD2Q68DX3 1309 aaPredicted RBP8.41□□□□□ -1.06
NUDCD1-204ENST00000521439 PMS2P1A4D2B8 440 aa8.41□□□□□ -1.06
NUDCD1-204ENST00000521439 CDC42EP1Q00587 391 aa8.41□□□□□ -1.06
NUDCD1-204ENST00000521439 THEMIS2Q5TEJ8 643 aa8.41□□□□□ -1.06
NUDCD1-204ENST00000521439 ERICH6BQ5W0A0 696 aa8.41□□□□□ -1.06
NUDCD1-204ENST00000521439 PLEKHH3Q7Z736 793 aa8.41□□□□□ -1.06
NUDCD1-204ENST00000521439 CMTM4Q8IZR5 234 aa8.41□□□□□ -1.06
NUDCD1-204ENST00000521439 LGI4Q8N135 537 aa8.41□□□□□ -1.06
NUDCD1-204ENST00000521439 CXorf38Q8TB03 319 aa8.41□□□□□ -1.06
NUDCD1-204ENST00000521439 NSUN6Q8TEA1 469 aaKnown RBP8.41□□□□□ -1.06
NUDCD1-204ENST00000521439 CFHR4Q92496 578 aa8.41□□□□□ -1.06
NUDCD1-204ENST00000521439 GPHA2Q96T91 129 aa8.41□□□□□ -1.06
NUDCD1-204ENST00000521439 PDCD2LQ9BRP1 358 aa8.41□□□□□ -1.06
NUDCD1-204ENST00000521439 ALDH2P05091 517 aa8.4□□□□□ -1.06
NUDCD1-204ENST00000521439 MYBP10242 640 aa8.4□□□□□ -1.06
NUDCD1-204ENST00000521439 RAC3P60763 192 aa8.4□□□□□ -1.06
NUDCD1-204ENST00000521439 ZFYVE27Q5T4F4 411 aa8.4□□□□□ -1.06
NUDCD1-204ENST00000521439 CHST15Q7LFX5 561 aaPredicted RBP8.4□□□□□ -1.06
NUDCD1-204ENST00000521439 PPP1R35Q8TAP8 253 aa8.4□□□□□ -1.06
NUDCD1-204ENST00000521439 CCHCR1Q8TD31 782 aa8.4□□□□□ -1.06
NUDCD1-204ENST00000521439 TIFAQ96CG3 184 aa8.4□□□□□ -1.06
NUDCD1-204ENST00000521439 KMT5AQ9NQR1 393 aa8.4□□□□□ -1.06
NUDCD1-204ENST00000521439 LANCL2Q9NS86 450 aa8.4□□□□□ -1.06
NUDCD1-204ENST00000521439 MATN2O00339 956 aa8.39□□□□□ -1.07
NUDCD1-204ENST00000521439 SLC16A6O15403 523 aa8.39□□□□□ -1.07
NUDCD1-204ENST00000521439 ADCY6O43306 1168 aa8.39□□□□□ -1.07
NUDCD1-204ENST00000521439 SLC26A4O43511 780 aa8.39□□□□□ -1.07
NUDCD1-204ENST00000521439 CNOT4O95628 575 aaKnown RBP8.39□□□□□ -1.07
NUDCD1-204ENST00000521439 OVCH2Q7RTZ1 564 aa8.39□□□□□ -1.07
NUDCD1-204ENST00000521439 CCAR1Q8IX12 1150 aaKnown RBP8.39□□□□□ -1.07
NUDCD1-204ENST00000521439 OR5M3Q8NGP4 307 aa8.39□□□□□ -1.07
NUDCD1-204ENST00000521439 CLPTM1LQ96KA5 538 aa8.39□□□□□ -1.07
NUDCD1-204ENST00000521439 CDC5LQ99459 802 aaKnown RBP8.39□□□□□ -1.07
NUDCD1-204ENST00000521439 ARNT2Q9HBZ2 717 aa8.39□□□□□ -1.07
NUDCD1-204ENST00000521439 MAN1C1Q9NR34 630 aa8.39□□□□□ -1.07
NUDCD1-204ENST00000521439 NCDNQ9UBB6 729 aa8.39□□□□□ -1.07
NUDCD1-204ENST00000521439 KRTAP9-7A8MTY7 169 aa8.38□□□□□ -1.07
NUDCD1-204ENST00000521439 FOXD2O60548 495 aaPredicted RBP8.38□□□□□ -1.07
NUDCD1-204ENST00000521439 TUSC2O75896 110 aa8.38□□□□□ -1.07
NUDCD1-204ENST00000521439 UBXN7O94888 489 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms