RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 ARHGAP28Q9P2N2 729 aa10.77□□□□□ -0.69
SPARC-202ENST00000520687 SALL4Q9UJQ4 1053 aa10.77□□□□□ -0.69
SPARC-202ENST00000520687 STYXL1Q9Y6J8 313 aa10.77□□□□□ -0.69
SPARC-202ENST00000520687 RANBP2P49792 3224 aaKnown RBP10.77□□□□□ -0.69
SPARC-202ENST00000520687 UNC80Q8N2C7 3258 aa10.77□□□□□ -0.69
SPARC-202ENST00000520687 ANKRD62A6NC57 917 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 ZNF233A6NK53 670 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 BUB1O43683 1085 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 NAMPTP43490 491 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 NOP2P46087 812 aaKnown RBP10.76□□□□□ -0.69
SPARC-202ENST00000520687 VSNL1P62760 191 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 TNNC1P63316 161 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 PHLDB3Q6NSJ2 640 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 CCNI2Q6ZMN8 369 aaPredicted RBP10.76□□□□□ -0.69
SPARC-202ENST00000520687 ZNF771Q7L3S4 317 aaPredicted RBP10.76□□□□□ -0.69
SPARC-202ENST00000520687 GPD1LQ8N335 351 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 LRRC57Q8N9N7 239 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 TPCN2Q8NHX9 752 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 U2AF1L4Q8WU68 220 aaKnown RBP10.76□□□□□ -0.69
SPARC-202ENST00000520687 SLC7A3Q8WY07 619 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 RFFLQ8WZ73 363 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 AGPAT1Q99943 283 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 HTATIP2Q9BUP3 242 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 PORCNQ9H237 461 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 PCIF1Q9H4Z3 704 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 MROH8Q9H579 483 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 DHX33Q9H6R0 707 aaKnown RBP10.76□□□□□ -0.69
SPARC-202ENST00000520687 TMEM134Q9H6X4 195 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 ABCB6Q9NP58 842 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 UBE2TQ9NPD8 197 aaPredicted RBP10.76□□□□□ -0.69
SPARC-202ENST00000520687 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
SPARC-202ENST00000520687 AGTPBP1Q9UPW5 1226 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 A0A0G2JMZ2 1700 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 HTTP42858 3142 aa10.76□□□□□ -0.69
SPARC-202ENST00000520687 PDE2AO00408 941 aaPredicted RBP10.75□□□□□ -0.69
SPARC-202ENST00000520687 EXTL3O43909 919 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 KIF4AO95239 1232 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 PLA2G4AP47712 749 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 SLC26A2P50443 739 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 EFNA5P52803 228 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 AP3M2P53677 418 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 POLGP54098 1239 aaPredicted RBP10.75□□□□□ -0.69
SPARC-202ENST00000520687 BPIFB4P59827 614 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 CLDN10P78369 228 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 CYP24A1Q07973 514 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 PPP3CAQ08209 521 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 SMC1AQ14683 1233 aaKnown RBP10.75□□□□□ -0.69
SPARC-202ENST00000520687 EMC2Q15006 297 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 ENOX2Q16206 610 aaKnown RBP10.75□□□□□ -0.69
SPARC-202ENST00000520687 C1orf220Q5T0J3 134 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 PPP1R2P3Q6NXS1 205 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 NFRKBQ6P4R8 1299 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 METTL7BQ6UX53 244 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 ARMC9Q7Z3E5 817 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 CCDC60Q8IWA6 550 aaPredicted RBP10.75□□□□□ -0.69
SPARC-202ENST00000520687 FAM71AQ8IYT1 594 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 RDH13Q8NBN7 331 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 FBXL13Q8NEE6 735 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 SHCBP1Q8NEM2 672 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 ACTRT1Q8TDG2 376 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 COG1Q8WTW3 980 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 SEPT1Q8WYJ6 367 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 POMGNT1Q8WZA1 660 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 CDCA5Q96FF9 252 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 NT5C1BQ96P26 610 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 NAP1L3Q99457 506 aaPredicted RBP10.75□□□□□ -0.69
SPARC-202ENST00000520687 GPR88Q9GZN0 384 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 TMEM117Q9H0C3 514 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 POLR3FQ9H1D9 316 aaPredicted RBP10.75□□□□□ -0.69
SPARC-202ENST00000520687 EPC1Q9H2F5 836 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 MED4Q9NPJ6 270 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 GPRC5CQ9NQ84 441 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 TTC7AQ9ULT0 858 aaPredicted RBP10.75□□□□□ -0.69
SPARC-202ENST00000520687 SYNGAP1Q96PV0 1343 aa10.75□□□□□ -0.69
SPARC-202ENST00000520687 CCDC188H7C350 402 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 FOXN3O00409 490 aaPredicted RBP10.74□□□□□ -0.69
SPARC-202ENST00000520687 HNRNPDLO14979 420 aaKnown RBP10.74□□□□□ -0.69
SPARC-202ENST00000520687 ZNF185O15231 689 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 SEC31AO94979 1220 aaKnown RBP10.74□□□□□ -0.69
SPARC-202ENST00000520687 ADSSP30520 456 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 ARL2P36404 184 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 GCLMP48507 274 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 GALCP54803 685 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 GCNT1Q02742 428 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 NNTQ13423 1086 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 GADL1Q6ZQY3 521 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 PEX26Q7Z412 305 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 IFT20Q8IY31 132 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 DEPTORQ8TB45 409 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 TCP11Q8WWU5 503 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 SHC3Q92529 594 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 BICD1Q96G01 975 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 ISCUQ9H1K1 167 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 IKZF4Q9H2S9 585 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 EFCC1Q9HA90 598 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 XPNPEP1Q9NQW7 623 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 MTMR10Q9NXD2 777 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 BTBD7Q9P203 1132 aa10.74□□□□□ -0.69
SPARC-202ENST00000520687 AJAP1Q9UKB5 411 aaPredicted RBP10.74□□□□□ -0.69
SPARC-202ENST00000520687 AMFRQ9UKV5 643 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms