RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 RNF39Q9H2S5 420 aa13.78□□□□□ -0.2
TRAPPC9-206ENST00000519482 PRMT7Q9NVM4 692 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-206ENST00000519482 KIF3AQ9Y496 699 aa13.78□□□□□ -0.2
TRAPPC9-206ENST00000519482 PLXNA3P51805 1871 aa13.78□□□□□ -0.2
TRAPPC9-206ENST00000519482 C2orf16Q68DN1 1984 aa13.78□□□□□ -0.2
TRAPPC9-206ENST00000519482 A0A087WWV3 80 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 TMEM221A6NGB7 291 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 LRRIQ4A6NIV6 560 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 M0R296 226 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 LILRB3O75022 631 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 EPCAMP16422 314 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 SYT1P21579 422 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 GJB2P29033 226 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 HOXD11P31277 338 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 OR1G1P47890 313 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 SIGLEC14Q08ET2 396 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 FAM187BQ17R55 369 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 TTC38Q5R3I4 469 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 ATAT1Q5SQI0 421 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 RARS2Q5T160 578 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 HAUS3Q68CZ6 603 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 CDCA2Q69YH5 1023 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 MCTP1Q6DN14 999 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 ZBTB8OSQ8IWT0 167 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 KMT2EQ8IZD2 1858 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 KLHL5Q96PQ7 755 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 HERC2P3Q9BVR0 1158 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 POMKQ9H5K3 350 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 GPRC5CQ9NQ84 441 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 MRPL17Q9NRX2 175 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 LMBRD1Q9NUN5 540 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 MIOSQ9NXC5 875 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 NOL7Q9UMY1 257 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 HES2Q9Y543 173 aa13.77□□□□□ -0.21
TRAPPC9-206ENST00000519482 B4GALT5O43286 388 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 EFEMP2O95967 443 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 MBD3O95983 291 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 URODP06132 367 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 CNPP09543 421 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 KLRC2P26717 231 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 SCNN1GP51170 649 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 CLCN4P51793 760 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 PKP1Q13835 747 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 LARP1BQ659C4 914 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 POTEGQ6S5H5 508 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 MAEAQ7L5Y9 396 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 CABP7Q86V35 215 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 PBXIP1Q96AQ6 731 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 FBXL18Q96ME1 805 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 ZFP42Q96MM3 310 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 C2orf40Q9H1Z8 148 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 FZD8Q9H461 694 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 NXF3Q9H4D5 531 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 MARCH5Q9NX47 278 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 CDH22Q9UJ99 828 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 USTQ9Y2C2 406 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 PRG3Q9Y2Y8 225 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 STK24Q9Y6E0 443 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 PIEZO1Q92508 2521 aa13.76□□□□□ -0.21
TRAPPC9-206ENST00000519482 ARHGEF35A5YM69 484 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 PRPF40AO75400 957 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 NPTXRO95502 500 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 SSBP05455 408 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 CYP11B2P19099 503 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 U2AF2P26368 475 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 NAMPTP43490 491 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 GRIK3Q13003 919 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 PDIA5Q14554 519 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 PPP2R5AQ15172 486 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 PADI6Q6TGC4 694 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 GPR149Q86SP6 731 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 ZBTB33Q86T24 672 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 GPR65Q8IYL9 337 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 PLCD3Q8N3E9 789 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 C12orf76Q8N812 135 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 C4orf32Q8N8J7 132 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 GSTCDQ8NEC7 633 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 RPS6KC1Q96S38 1066 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 COLEC11Q9BWP8 271 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 APOL6Q9BWW8 343 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 SFXN1Q9H9B4 322 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 LRWD1Q9UFC0 647 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 DPP7Q9UHL4 492 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 SORCS3Q9UPU3 1222 aa13.75□□□□□ -0.21
TRAPPC9-206ENST00000519482 TRIP11Q15643 1979 aa13.74□□□□□ -0.21
TRAPPC9-206ENST00000519482 C2CD4DB7Z1M9 353 aa13.74□□□□□ -0.21
TRAPPC9-206ENST00000519482 N4BP3O15049 544 aa13.74□□□□□ -0.21
TRAPPC9-206ENST00000519482 C1RP00736 705 aa13.74□□□□□ -0.21
TRAPPC9-206ENST00000519482 ADH1AP07327 375 aa13.74□□□□□ -0.21
TRAPPC9-206ENST00000519482 SP100P23497 879 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-206ENST00000519482 AKAP5P24588 427 aa13.74□□□□□ -0.21
TRAPPC9-206ENST00000519482 CCT6AP40227 531 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-206ENST00000519482 GLUD2P49448 558 aa13.74□□□□□ -0.21
TRAPPC9-206ENST00000519482 KIAA0319Q5VV43 1072 aa13.74□□□□□ -0.21
TRAPPC9-206ENST00000519482 ELMSAN1Q6PJG2 1045 aa13.74□□□□□ -0.21
TRAPPC9-206ENST00000519482 C15orf39Q6ZRI6 1047 aa13.74□□□□□ -0.21
TRAPPC9-206ENST00000519482 CDR2LQ86X02 465 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-206ENST00000519482 SUGP1Q8IWZ8 645 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms