RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 TSPAN1O60635 241 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 FOSL2P15408 326 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 IGFBP4P22692 258 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 HOXA11P31270 313 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-206ENST00000519115 CTNNB1P35222 781 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 AFMP43652 599 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 ZNF131P52739 623 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 SNRPFP62306 86 aaKnown RBP8.33□□□□□ -1.08
SDCBP-206ENST00000519115 MYL5Q02045 173 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 CUL4BQ13620 913 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 ALCAMQ13740 583 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 BTG3Q14201 252 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-206ENST00000519115 ADGRE1Q14246 886 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 CDCA2Q69YH5 1023 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-206ENST00000519115 C1orf186Q6ZWK4 172 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 CDR2LQ86X02 465 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-206ENST00000519115 ZBTB8OSQ8IWT0 167 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 ADSSL1Q8N142 457 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 GUF1Q8N442 669 aaKnown RBP8.33□□□□□ -1.08
SDCBP-206ENST00000519115 FIBCD1Q8N539 461 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 DEPTORQ8TB45 409 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 NOC3LQ8WTT2 800 aaKnown RBP8.33□□□□□ -1.08
SDCBP-206ENST00000519115 DDX12PQ92771 950 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 KIFAP3Q92845 792 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 LPPQ93052 612 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 ZNF689Q96CS4 500 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-206ENST00000519115 IFT74Q96LB3 600 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 PPP1R9BQ96SB3 815 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 GAS2L1Q99501 681 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-206ENST00000519115 NTPCRQ9BSD7 190 aaKnown RBP8.33□□□□□ -1.08
SDCBP-206ENST00000519115 ST6GALNAC4Q9H4F1 302 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 CBX8Q9HC52 389 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 FAM105AQ9NUU6 356 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 RNF19AQ9NV58 838 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 TMEM161AQ9NX61 479 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 CGNQ9P2M7 1197 aaKnown RBP8.33□□□□□ -1.08
SDCBP-206ENST00000519115 RWDD2AQ9UIY3 292 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 USP20Q9Y2K6 914 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 MRPL42Q9Y6G3 142 aaKnown RBP8.33□□□□□ -1.08
SDCBP-206ENST00000519115 COL6A3P12111 3177 aa8.33□□□□□ -1.08
SDCBP-206ENST00000519115 EYSQ5T1H1 3165 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 A0A0U1RQF3 1178 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 MYMKA6NI61 221 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 TTLL13PA6NNM8 815 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 PPP1R3GB7ZBB8 358 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 PSMA7O14818 248 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 CSPG5O95196 566 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 FGFR1OPO95684 399 aaKnown RBP8.32□□□□□ -1.08
SDCBP-206ENST00000519115 EDN1P05305 212 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 PRKCBP05771 671 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 LINC00271P0C7V0 271 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 ARF4P18085 180 aaPredicted RBP8.32□□□□□ -1.08
SDCBP-206ENST00000519115 BMP6P22004 513 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 NAMPTP43490 491 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 PEX3P56589 373 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 ERVK-21P61565 698 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 FAM189BP81408 668 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 LRRC63Q05C16 580 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 POU5F1BQ06416 359 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 SPAG1Q07617 926 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 CCDC173Q0VFZ6 552 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 DMP1Q13316 513 aaPredicted RBP8.32□□□□□ -1.08
SDCBP-206ENST00000519115 HSP90AA2PQ14568 343 aaPredicted RBP8.32□□□□□ -1.08
SDCBP-206ENST00000519115 PPP2R5AQ15172 486 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 AMHR2Q16671 573 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 TMEM132AQ24JP5 1023 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 DPCR1Q3MIW9 517 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 EPC2Q52LR7 807 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 CLLU1OSQ5K130 101 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 SPATA1Q5VX52 437 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 CENPPQ6IPU0 288 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 STXBP4Q6ZWJ1 553 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.32□□□□□ -1.08
SDCBP-206ENST00000519115 ZNF598Q86UK7 904 aaKnown RBP8.32□□□□□ -1.08
SDCBP-206ENST00000519115 TMEM192Q8IY95 271 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 CMTR2Q8IYT2 770 aaKnown RBP8.32□□□□□ -1.08
SDCBP-206ENST00000519115 MICALL1Q8N3F8 863 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 FBXO22Q8NEZ5 403 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 HELQQ8TDG4 1101 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 PDLIM2Q96JY6 352 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 DRC1Q96MC2 740 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 REEP2Q9BRK0 252 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 APOL6Q9BWW8 343 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 EIF2AQ9BY44 585 aaKnown RBP8.32□□□□□ -1.08
SDCBP-206ENST00000519115 NFKBIZQ9BYH8 718 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 DNAJC25Q9H1X3 360 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 C2orf40Q9H1Z8 148 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 CHST12Q9NRB3 414 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 EXOC1Q9NV70 894 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 INPP5FQ9Y2H2 1132 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 STXBP5LQ9Y2K9 1186 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 PCDHB2Q9Y5E7 798 aa8.32□□□□□ -1.08
SDCBP-206ENST00000519115 PHLPP2Q6ZVD8 1323 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 CNTNAP2Q9UHC6 1331 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 PRUNE2Q8WUY3 3088 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 REV3LO60673 3130 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 H0YCG3 227 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 EIF3DO15371 548 aaKnown RBP eCLIP8.31□□□□□ -1.08
SDCBP-206ENST00000519115 SLC16A4O15374 487 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 LPXNO60711 386 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms