RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	SLC12A3	P55017	1021 aa		26.6	■■□□□ 1.85
CNOT7-204	ENST00000518885	STRN3	Q13033	797 aa		26.6	■■□□□ 1.85
CNOT7-204	ENST00000518885	SPIRE2	Q8WWL2	714 aa		26.6	■■□□□ 1.85
CNOT7-204	ENST00000518885	COLEC11	Q9BWP8	271 aa		26.6	■■□□□ 1.85
CNOT7-204	ENST00000518885	MRPL4	Q9BYD3	311 aa	Known RBP	26.6	■■□□□ 1.85
CNOT7-204	ENST00000518885	ZBP1	Q9H171	429 aa		26.6	■■□□□ 1.85
CNOT7-204	ENST00000518885	CCDC39	Q9UFE4	941 aa		26.6	■■□□□ 1.85
CNOT7-204	ENST00000518885	ODF2L	Q9ULJ1	636 aa		26.6	■■□□□ 1.85
CNOT7-204	ENST00000518885	IRAK3	Q9Y616	596 aa		26.6	■■□□□ 1.85
CNOT7-204	ENST00000518885	BRWD1	Q9NSI6	2320 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	C2orf71	A6NGG8	1288 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	HIDE1	A8MVS5	230 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	NRP1	O14786	923 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	CTSA	P10619	480 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	PLS3	P13797	630 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	CLUL1	Q15846	466 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	FAM178B	Q8IXR5	827 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	COLGALT2	Q8IYK4	626 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	DAW1	Q8N136	415 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	CASP10	Q92851	521 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	ZFP42	Q96MM3	310 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	NECAB3	Q96P71	396 aa	Predicted RBP	26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	POLD4	Q9HCU8	107 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	MTMR6	Q9Y217	621 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	TNFSF13B	Q9Y275	285 aa		26.59	■■□□□ 1.85
CNOT7-204	ENST00000518885	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	IL9	P15248	144 aa		26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	ABCD1	P33897	745 aa		26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	AFF1	P51825	1210 aa	Known RBP	26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	DLX2	Q07687	328 aa	Predicted RBP	26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	DSC1	Q08554	894 aa		26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	SMAD2	Q15796	467 aa	Known RBP	26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	TMEM184A	Q6ZMB5	413 aa		26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	PPFIBP1	Q86W92	1011 aa		26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	MSLNL	Q96KJ4	702 aa		26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	NTPCR	Q9BSD7	190 aa	Known RBP	26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	EMILIN2	Q9BXX0	1053 aa		26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	ARHGAP28	Q9P2N2	729 aa		26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	CLIC4	Q9Y696	253 aa		26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	BDP1	A6H8Y1	2624 aa		26.58	■■□□□ 1.85
CNOT7-204	ENST00000518885	MBTPS2	O43462	519 aa		26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	KRT18	P05783	430 aa	Known RBP	26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	HOXB8	P17481	243 aa	Predicted RBP	26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	SSTR3	P32745	418 aa	Predicted RBP	26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	MAPK7	Q13164	816 aa		26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	TMEM173	Q86WV6	379 aa	Predicted RBP	26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	SMRP1	Q8NCR6	262 aa		26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	CCSER1	Q9C0I3	900 aa		26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	CLEC1B	Q9P126	229 aa		26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	BARX2	Q9UMQ3	279 aa	Predicted RBP	26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	SRPRB	Q9Y5M8	271 aa	Known RBP	26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	MORC2	Q9Y6X9	1032 aa	Predicted RBP	26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	MYO7A	Q13402	2215 aa		26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	TCF20	Q9UGU0	1960 aa	Known RBP	26.57	■■□□□ 1.84
CNOT7-204	ENST00000518885	GLP2R	O95838	553 aa		26.56	■■□□□ 1.84
CNOT7-204	ENST00000518885	YARS	P54577	528 aa	Known RBP	26.56	■■□□□ 1.84
CNOT7-204	ENST00000518885	RAD51AP2	Q09MP3	1159 aa		26.56	■■□□□ 1.84
CNOT7-204	ENST00000518885	TPRN	Q4KMQ1	711 aa		26.56	■■□□□ 1.84
CNOT7-204	ENST00000518885	GPBP1	Q86WP2	473 aa		26.56	■■□□□ 1.84
CNOT7-204	ENST00000518885	GJD3	Q8N144	294 aa		26.56	■■□□□ 1.84
CNOT7-204	ENST00000518885	ZNF396	Q96N95	335 aa	Predicted RBP	26.56	■■□□□ 1.84
CNOT7-204	ENST00000518885	CCDC94	Q9BW85	323 aa	Predicted RBP	26.56	■■□□□ 1.84
CNOT7-204	ENST00000518885	MRPL17	Q9NRX2	175 aa	Known RBP	26.56	■■□□□ 1.84
CNOT7-204	ENST00000518885	TOPORS	Q9NS56	1045 aa	Predicted RBP	26.56	■■□□□ 1.84
CNOT7-204	ENST00000518885	SNTG2	Q9NY99	539 aa		26.56	■■□□□ 1.84
CNOT7-204	ENST00000518885	KLK14	Q9P0G3	267 aa		26.56	■■□□□ 1.84
CNOT7-204	ENST00000518885	PRG3	Q9Y2Y8	225 aa	Predicted RBP	26.56	■■□□□ 1.84
CNOT7-204	ENST00000518885	SLC16A4	O15374	487 aa		26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	UROD	P06132	367 aa		26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	TH	P07101	528 aa		26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	PLCG1	P19174	1290 aa		26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	PTPA	Q15257	358 aa		26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	ZNF568	Q3ZCX4	644 aa		26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	NT5DC1	Q5TFE4	455 aa		26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	ADHFE1	Q8IWW8	467 aa		26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	LARP4B	Q92615	738 aa	Known RBP	26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	RAD54L	Q92698	747 aa		26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	ACO2	Q99798	780 aa	Known RBP	26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	TCHP	Q9BT92	498 aa		26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	DZANK1	Q9NVP4	752 aa		26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	MUC3A	Q02505	3323 aa		26.55	■■□□□ 1.84
CNOT7-204	ENST00000518885	TTLL13P	A6NNM8	815 aa		26.54	■■□□□ 1.84
CNOT7-204	ENST00000518885	B4GALT3	O60512	393 aa		26.54	■■□□□ 1.84
CNOT7-204	ENST00000518885	RECQL4	O94761	1208 aa		26.54	■■□□□ 1.84
CNOT7-204	ENST00000518885	SOD2	P04179	222 aa		26.54	■■□□□ 1.84
CNOT7-204	ENST00000518885	MARCKS	P29966	332 aa	Predicted RBP	26.54	■■□□□ 1.84
CNOT7-204	ENST00000518885	CEBPZ	Q03701	1054 aa	Known RBP	26.54	■■□□□ 1.84
CNOT7-204	ENST00000518885	TUSC3	Q13454	348 aa		26.54	■■□□□ 1.84
CNOT7-204	ENST00000518885	KARS	Q15046	597 aa	Known RBP	26.54	■■□□□ 1.84
CNOT7-204	ENST00000518885	LLGL2	Q6P1M3	1020 aa		26.54	■■□□□ 1.84
CNOT7-204	ENST00000518885	ELMSAN1	Q6PJG2	1045 aa		26.54	■■□□□ 1.84
CNOT7-204	ENST00000518885	BCL7C	Q8WUZ0	217 aa	Predicted RBP	26.54	■■□□□ 1.84
CNOT7-204	ENST00000518885	MIOS	Q9NXC5	875 aa		26.54	■■□□□ 1.84
CNOT7-204	ENST00000518885	STK17A	Q9UEE5	414 aa		26.54	■■□□□ 1.84
CNOT7-204	ENST00000518885	SFI1	A8K8P3	1242 aa		26.53	■■□□□ 1.84
CNOT7-204	ENST00000518885	CLASP2	O75122	1294 aa	Known RBP	26.53	■■□□□ 1.84
CNOT7-204	ENST00000518885	TBCA	O75347	108 aa	Known RBP	26.53	■■□□□ 1.84
CNOT7-204	ENST00000518885	FAM13A	O94988	1023 aa		26.53	■■□□□ 1.84
CNOT7-204	ENST00000518885	MCF2	P10911	925 aa		26.53	■■□□□ 1.84
CNOT7-204	ENST00000518885	KCNC3	Q14003	757 aa		26.53	■■□□□ 1.84

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms