RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 ZFHX4Q86UP3 3567 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 LAMTOR5O43504 91 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 KRT37O76014 449 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 ERLIN2O94905 339 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 FSHRP23945 695 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 PPP2R5CQ13362 524 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 FUT10Q6P4F1 479 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 PARM1Q6UWI2 310 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 RSPO2Q6UXX9 243 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 Q6ZUG5 572 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 MTSS1LQ765P7 747 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 RNF149Q8NC42 400 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 TCP11Q8WWU5 503 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 FGF14Q92915 247 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 BRF1Q92994 677 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 CEP170P1Q96L14 293 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 ZFP42Q96MM3 310 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 RPP25Q9BUL9 199 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 SLC26A6Q9BXS9 759 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 EIF2AQ9BY44 585 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 SPATA6Q9NWH7 488 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 MIOSQ9NXC5 875 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 NCDNQ9UBB6 729 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 CDH7Q9ULB5 785 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 PCDHA4Q9UN74 947 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 GIT1Q9Y2X7 761 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 CHD8Q9HCK8 2581 aa13.78□□□□□ -0.2
TRAPPC9-204ENST00000518723 M0R2N6 131 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 EML1O00423 815 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 TSPAN1O60635 241 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 P4HBP07237 508 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 HNRNPA1P09651 372 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 NLRP5P59047 1200 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 SNW1Q13573 536 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 MLF2Q15773 248 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 NOTUMQ6P988 496 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 FERMT3Q86UX7 667 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 ZBTB44Q8NCP5 570 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 GSTCDQ8NEC7 633 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 NELL1Q92832 810 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 B3GALT6Q96L58 329 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 AGXT2Q9BYV1 514 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 CSRNP2Q9H175 543 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 EPC1Q9H2F5 836 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 ZMYM2Q9UBW7 1377 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 FBXW11Q9UKB1 542 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 ADAM28Q9UKQ2 775 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 VAV3Q9UKW4 847 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 HES2Q9Y543 173 aa13.77□□□□□ -0.21
TRAPPC9-204ENST00000518723 PRR5-ARHGAP8B1AHC4 643 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 LILRB5O75023 590 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 CPA1P15085 419 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 HOXA9P31269 272 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 ATXN1P54253 815 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 PTENP60484 403 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 ARHGAP8P85298 464 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 PFKPQ01813 784 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 LMNB2Q03252 620 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 POU5F1BQ06416 359 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 SLC44A4Q53GD3 710 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 BMP2KLQ5H9B9 411 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 GRASPQ7Z6J2 395 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 C4orf19Q8IY42 314 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 HACE1Q8IYU2 909 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 FAM177A1Q8N128 213 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 DAGLBQ8NCG7 672 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 ST13P5Q8NFI4 369 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 ATRIPQ8WXE1 791 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 FGF13Q92913 245 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 KCNB2Q92953 911 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 SECISBP2LQ93073 1101 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 FAM20AQ96MK3 541 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 ZSCAN32Q9NX65 697 aa13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 WRAP73Q9P2S5 460 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 DDX25Q9UHL0 483 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-204ENST00000518723 SF3B1O75533 1304 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 MTCL1Q9Y4B5 1905 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 FAM170BA6NMN3 283 aa13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 SLC37A4O43826 429 aa13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 POU2F2P09086 479 aa13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 RPL17P18621 184 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 CSTF1Q05048 431 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 NCBP1Q09161 790 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 GRIK3Q13003 919 aa13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 MXD4Q14582 209 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 UBXN2BQ14CS0 331 aa13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 EMC2Q15006 297 aa13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 AMHR2Q16671 573 aa13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 RTP2Q5QGT7 225 aa13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 GLYCTKQ8IVS8 523 aa13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 BLIDQ8IZY5 108 aa13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 CLDN23Q96B33 292 aa13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 NXF3Q9H4D5 531 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 KCNMB3Q9NPA1 279 aa13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 LTB4R2Q9NPC1 389 aa13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 SMG5Q9UPR3 1016 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 MTF2Q9Y483 593 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-204ENST00000518723 CHD6Q8TD26 2715 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms