RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.52■□□□□ 0.88
FAM49B-208ENST00000518344 B4GALT3O60512 393 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 KCNA5P22460 613 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 GTF2F1P35269 517 aaKnown RBP eCLIP20.52■□□□□ 0.88
FAM49B-208ENST00000518344 SLC11A1P49279 550 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 BECN1Q14457 450 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 PLPP4Q5VZY2 271 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 CCDC73Q6ZRK6 1079 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 TAS1R3Q7RTX0 852 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 TMC7Q7Z402 723 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 APBB1IPQ7Z5R6 666 aaPredicted RBP20.52■□□□□ 0.88
FAM49B-208ENST00000518344 RPS6KC1Q96S38 1066 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 ACO2Q99798 780 aaKnown RBP20.52■□□□□ 0.88
FAM49B-208ENST00000518344 TCF25Q9BQ70 676 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 TARS2Q9BW92 718 aaKnown RBP20.52■□□□□ 0.88
FAM49B-208ENST00000518344 CLDND1Q9NY35 253 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 STK17AQ9UEE5 414 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 FAN1Q9Y2M0 1017 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 GDAQ9Y2T3 454 aa20.52■□□□□ 0.88
FAM49B-208ENST00000518344 CARNS1A5YM72 827 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 NCK2O43639 380 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 TBCAO75347 108 aaKnown RBP20.51■□□□□ 0.87
FAM49B-208ENST00000518344 CA8P35219 290 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 NRIP1P48552 1158 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 KCNQ1P51787 676 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 DNM1Q05193 864 aaKnown RBP20.51■□□□□ 0.87
FAM49B-208ENST00000518344 DCAF4L1Q3SXM0 396 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 PDE12Q6L8Q7 609 aaKnown RBP20.51■□□□□ 0.87
FAM49B-208ENST00000518344 SV2BQ7L1I2 683 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 DYMQ7RTS9 669 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 ZBTB33Q86T24 672 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 TMEM173Q86WV6 379 aaPredicted RBP20.51■□□□□ 0.87
FAM49B-208ENST00000518344 PDILTQ8N807 584 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 TMEM161BQ8NDZ6 487 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 PABPC5Q96DU9 382 aaKnown RBP20.51■□□□□ 0.87
FAM49B-208ENST00000518344 IGSF21Q96ID5 467 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 TMEM175Q9BSA9 504 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 TCHPQ9BT92 498 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 TLE6Q9H808 572 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 PARVGQ9HBI0 331 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 TNFSF13BQ9Y275 285 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 UNC80Q8N2C7 3258 aa20.51■□□□□ 0.87
FAM49B-208ENST00000518344 DLL1O00548 723 aa20.5■□□□□ 0.87
FAM49B-208ENST00000518344 NRP1O14786 923 aa20.5■□□□□ 0.87
FAM49B-208ENST00000518344 PER2O15055 1255 aa20.5■□□□□ 0.87
FAM49B-208ENST00000518344 INPPL1O15357 1258 aa20.5■□□□□ 0.87
FAM49B-208ENST00000518344 CUTAO60888 179 aa20.5■□□□□ 0.87
FAM49B-208ENST00000518344 MAPTP10636 758 aaKnown RBP20.5■□□□□ 0.87
FAM49B-208ENST00000518344 STAT6P42226 847 aa20.5■□□□□ 0.87
FAM49B-208ENST00000518344 OR1G1P47890 313 aa20.5■□□□□ 0.87
FAM49B-208ENST00000518344 ATL3Q6DD88 541 aa20.5■□□□□ 0.87
FAM49B-208ENST00000518344 NGRNQ9NPE2 291 aaKnown RBP20.5■□□□□ 0.87
FAM49B-208ENST00000518344 CFAP45Q9UL16 551 aa20.5■□□□□ 0.87
FAM49B-208ENST00000518344 H0YCG3 227 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 H3BQ06 376 aaPredicted RBP20.49■□□□□ 0.87
FAM49B-208ENST00000518344 FSCN2O14926 492 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 LINC01565O15544 149 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 NR1I2O75469 434 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 RECQL4O94761 1208 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 BRD1O95696 1058 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 BMS1Q14692 1282 aaKnown RBP20.49■□□□□ 0.87
FAM49B-208ENST00000518344 ZNF568Q3ZCX4 644 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 HAUS6Q7Z4H7 955 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 COLGALT2Q8IYK4 626 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 VPS52Q8N1B4 723 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 GSTCDQ8NEC7 633 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 KCNG4Q8TDN1 519 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 BCL7CQ8WUZ0 217 aaPredicted RBP20.49■□□□□ 0.87
FAM49B-208ENST00000518344 COL25A1Q9BXS0 654 aaPredicted RBP20.49■□□□□ 0.87
FAM49B-208ENST00000518344 PTPRHQ9HD43 1115 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 PRG3Q9Y2Y8 225 aaPredicted RBP20.49■□□□□ 0.87
FAM49B-208ENST00000518344 ZDHHC9Q9Y397 364 aa20.49■□□□□ 0.87
FAM49B-208ENST00000518344 A0A087X0B3 334 aa20.48■□□□□ 0.87
FAM49B-208ENST00000518344 HIDE1A8MVS5 230 aa20.48■□□□□ 0.87
FAM49B-208ENST00000518344 K7ENM7 598 aa20.48■□□□□ 0.87
FAM49B-208ENST00000518344 TRAK2O60296 914 aa20.48■□□□□ 0.87
FAM49B-208ENST00000518344 HARSP12081 509 aaKnown RBP20.48■□□□□ 0.87
FAM49B-208ENST00000518344 ME1P48163 572 aa20.48■□□□□ 0.87
FAM49B-208ENST00000518344 ZNF131P52739 623 aa20.48■□□□□ 0.87
FAM49B-208ENST00000518344 NCKAP1LP55160 1127 aa20.48■□□□□ 0.87
FAM49B-208ENST00000518344 OSTNP61366 133 aa20.48■□□□□ 0.87
FAM49B-208ENST00000518344 GRIK3Q13003 919 aa20.48■□□□□ 0.87
FAM49B-208ENST00000518344 DDX53Q86TM3 631 aaKnown RBP20.48■□□□□ 0.87
FAM49B-208ENST00000518344 BICD1Q96G01 975 aa20.48■□□□□ 0.87
FAM49B-208ENST00000518344 ZBTB45Q96K62 511 aaPredicted RBP20.48■□□□□ 0.87
FAM49B-208ENST00000518344 CDT1Q9H211 546 aa20.48■□□□□ 0.87
FAM49B-208ENST00000518344 REV3LO60673 3130 aa20.48■□□□□ 0.87
FAM49B-208ENST00000518344 MYMKA6NI61 221 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 CXCL14O95715 111 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 BMP1P13497 986 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 MATR3P43243 847 aaKnown RBP eCLIP20.47■□□□□ 0.87
FAM49B-208ENST00000518344 DSC1Q08554 894 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 ADAM15Q13444 863 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 SMC1AQ14683 1233 aaKnown RBP20.47■□□□□ 0.87
FAM49B-208ENST00000518344 CTC1Q2NKJ3 1217 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 SHC4Q6S5L8 630 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 MPZL3Q6UWV2 235 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 FAM178BQ8IXR5 827 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 DDX12PQ92771 950 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 CCDC94Q9BW85 323 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms