RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 SSRP1Q08945 709 aaKnown RBP4.1□□□□□ -1.75
CPNE3-204ENST00000517862 ZYXQ15942 572 aaKnown RBP4.1□□□□□ -1.75
CPNE3-204ENST00000517862 ZXDCQ2QGD7 858 aaPredicted RBP4.1□□□□□ -1.75
CPNE3-204ENST00000517862 DAB2IPQ5VWQ8 1189 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 TXNDC11Q6PKC3 985 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 TSSK4Q6SA08 328 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 LBX2Q6XYB7 198 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 GPR155Q7Z3F1 870 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 DPP9Q86TI2 863 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 TTC6Q86TZ1 520 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 CCDC84Q86UT8 332 aaPredicted RBP4.1□□□□□ -1.75
CPNE3-204ENST00000517862 SCYL3Q8IZE3 742 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 CHCHD4Q8N4Q1 142 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 IL22RA1Q8N6P7 574 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 OR6P1Q8NGX9 317 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 PAGR1Q9BTK6 254 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 BRINP2Q9C0B6 783 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 LMAN2LQ9H0V9 348 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 TRPV6Q9H1D0 765 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 DDX56Q9NY93 547 aaKnown RBP4.1□□□□□ -1.75
CPNE3-204ENST00000517862 RBPJLQ9UBG7 517 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 TRMT112Q9UI30 125 aaKnown RBP4.1□□□□□ -1.75
CPNE3-204ENST00000517862 CA14Q9ULX7 337 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 PCDHB10Q9UN67 800 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 SOX13Q9UN79 622 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 CYP8B1Q9UNU6 501 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 PRKAB1Q9Y478 270 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 SAMM50Q9Y512 469 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 INSL6Q9Y581 213 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 CORINQ9Y5Q5 1042 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 HEMK1Q9Y5R4 338 aaPredicted RBP4.1□□□□□ -1.75
CPNE3-204ENST00000517862 NID2Q14112 1375 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 PLXNB3Q9ULL4 1909 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 A0A1W2PQH9 124 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 C4orf47A7E2U8 309 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 NFIBO00712 420 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 GRM6O15303 877 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 CYP26A1O43174 497 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 GLP2RO95838 553 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 ZNF806P0C7X5 589 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 ESRRAP11474 423 aaPredicted RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 CSRP1P21291 193 aaKnown RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 ITPKBP27987 946 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 RBMXP38159 391 aaKnown RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 MASP1P48740 699 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 HERVK_113P62684 666 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 NFKB2Q00653 900 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 RPL6Q02878 288 aaKnown RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 TEFQ10587 303 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 TDGQ13569 410 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 SIM2Q14190 667 aaPredicted RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 LRRC14Q15048 493 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 SF3B3Q15393 1217 aaKnown RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 WIPI1Q5MNZ9 446 aaPredicted RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 HEATR6Q6AI08 1181 aaKnown RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 CCSAPQ6IQ19 270 aaPredicted RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 C16orf86Q6ZW13 317 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 SYDE1Q6ZW31 735 aaPredicted RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 RBM23Q86U06 439 aaKnown RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 REXO1Q8N1G1 1221 aaKnown RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 PCSK9Q8NBP7 692 aaKnown RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 SHCBP1Q8NEM2 672 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 KLHDC9Q8NEP7 349 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 SPATA3Q8NHX4 192 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 MOCOSQ96EN8 888 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 FEZ1Q99689 392 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 METTL22Q9BUU2 404 aaPredicted RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 METTL14Q9HCE5 456 aaKnown RBP4.09□□□□□ -1.75
CPNE3-204ENST00000517862 WNT16Q9UBV4 365 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 ZMYM5Q9UJ78 669 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 DUSP12Q9UNI6 340 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 SYNRGQ9UMZ2 1314 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 ZMYM2Q9UBW7 1377 aa4.09□□□□□ -1.75
CPNE3-204ENST00000517862 ADAMTS9Q9P2N4 1935 aa4.09□□□□□ -1.76
CPNE3-204ENST00000517862 MYADML2A6NDP7 307 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 H0Y626 953 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 KCNQ3O43525 872 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 B4GALT4O60513 344 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 DNAJA2O60884 412 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 LRRN2O75325 713 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 TRIM16O95361 564 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 SNRPA1P09661 255 aaKnown RBP4.08□□□□□ -1.76
CPNE3-204ENST00000517862 BMP3P12645 472 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 KRT10P13645 584 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 NRIP1P48552 1158 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 HMGCS2P54868 508 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 CASP7P55210 303 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 GRB14Q14449 540 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 OVOS1Q6IE37 1185 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 LRFN4Q6PJG9 635 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 ADGRD2Q7Z7M1 963 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 FAM83AQ86UY5 434 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 ZDHHC14Q8IZN3 488 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 TDRD5Q8NAT2 981 aaKnown RBP4.08□□□□□ -1.76
CPNE3-204ENST00000517862 RBBP8NLQ8NC74 664 aaPredicted RBP4.08□□□□□ -1.76
CPNE3-204ENST00000517862 DEFB124Q8NES8 71 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 PI4K2BQ8TCG2 481 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 GPBAR1Q8TDU6 330 aa4.08□□□□□ -1.76
CPNE3-204ENST00000517862 THAP3Q8WTV1 239 aaPredicted RBP4.08□□□□□ -1.76
CPNE3-204ENST00000517862 SLC7A3Q8WY07 619 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms