RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 O00370 1275 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 CLDN3O15551 220 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 ECEL1O95672 775 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 HADHBP55084 474 aaKnown RBP13.26□□□□□ -0.29
PCM1-203ENST00000517545 KRT17Q04695 432 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 GRAPQ13588 217 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 TRIM68Q6AZZ1 485 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 GRAPLQ8TC17 118 aaPredicted RBP13.26□□□□□ -0.29
PCM1-203ENST00000517545 AGPAT3Q9NRZ7 376 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 NARFQ9UHQ1 456 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 VAV3Q9UKW4 847 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 SLC26A4O43511 780 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 SPOPO43791 374 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 EYA4O95677 639 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 FOXN2P32314 431 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 STX2P32856 288 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 SHMT1P34896 483 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 BLMHQ13867 455 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 TAF11Q15544 211 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 NSMFQ6X4W1 530 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 SRRM1Q8IYB3 904 aaKnown RBP13.26□□□□□ -0.29
PCM1-203ENST00000517545 ATG4AQ8WYN0 398 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 TMEM237Q96Q45 408 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 YIPF3Q9GZM5 350 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 KLHL14Q9P2G3 628 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 ASIC3Q9UHC3 531 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 MTUS1Q9ULD2 1270 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 FRMD4BQ9Y2L6 1034 aa13.26□□□□□ -0.29
PCM1-203ENST00000517545 CCNB1P14635 433 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 USH1GQ495M9 461 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 PTF1AQ7RTS3 328 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 PRUNE1Q86TP1 453 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 FIZ1Q96SL8 496 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 GAKO14976 1311 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 CHMP2AO43633 222 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 UNC5CO95185 931 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 VPS41P49754 854 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 TPH2Q8IWU9 490 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 RPS6KC1Q96S38 1066 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 SERPINB13Q9UIV8 391 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 SGPL1O95470 568 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 GGPS1O95749 300 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 LINGO3P0C6S8 592 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 HOXA13P31271 388 aaPredicted RBP13.25□□□□□ -0.29
PCM1-203ENST00000517545 RHBDF2Q6PJF5 856 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 FAM163AQ96GL9 167 aaPredicted RBP13.25□□□□□ -0.29
PCM1-203ENST00000517545 MYLK2Q9H1R3 596 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 CHST7Q9NS84 486 aa13.25□□□□□ -0.29
PCM1-203ENST00000517545 CORO1CQ9ULV4 474 aaPredicted RBP13.25□□□□□ -0.29
PCM1-203ENST00000517545 TISP43B9A030 160 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 EIF3DO15371 548 aaKnown RBP eCLIP13.24□□□□□ -0.29
PCM1-203ENST00000517545 TTC4O95801 387 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 Q4G0T1 1027 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 C1orf186Q6ZWK4 172 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 SPOCK2Q92563 424 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 SAAL1Q96ER3 474 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 NAF1Q96HR8 494 aaKnown RBP13.24□□□□□ -0.29
PCM1-203ENST00000517545 PAIP2Q9BPZ3 127 aaKnown RBP13.24□□□□□ -0.29
PCM1-203ENST00000517545 MKNK1Q9BUB5 465 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 WNT8AQ9H1J5 351 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 DMAC2Q9NW81 257 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 EXOC3O60645 756 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 GM2AP17900 193 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 TAC1P20366 129 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 TARSP26639 723 aaKnown RBP13.24□□□□□ -0.29
PCM1-203ENST00000517545 BFSP1Q12934 665 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 MTFR1Q15390 333 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 HS2ST1Q7LGA3 356 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 NUP85Q9BW27 656 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 TRIM7Q9C029 511 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 PARVGQ9HBI0 331 aa13.24□□□□□ -0.29
PCM1-203ENST00000517545 FAM196BA6NMK8 535 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 THAP12O43422 761 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 GAP43P17677 238 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 ITGA8P53708 1063 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 SGO2Q562F6 1265 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 TMEM63BQ5T3F8 832 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 RNF43Q68DV7 783 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 MOXD1Q6UVY6 613 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 ZNF720Q7Z2F6 126 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 NOP9Q86U38 636 aaKnown RBP13.23□□□□□ -0.29
PCM1-203ENST00000517545 KIAA0825Q8IV33 1275 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 ZNF564Q8TBZ8 553 aaPredicted RBP13.23□□□□□ -0.29
PCM1-203ENST00000517545 ERP27Q96DN0 273 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 OSBPL1AQ9BXW6 950 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 PCIF1Q9H4Z3 704 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 EMSYQ7Z589 1322 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 GNPATO15228 680 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 C11orf91Q3C1V1 193 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 FAM178BQ8IXR5 827 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 PARD3BQ8TEW8 1205 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 DYDC2Q96IM9 177 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 HERPUD2Q9BSE4 406 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 PITPNM3Q9BZ71 974 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 LRRC19Q9H756 370 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 NINJ2Q9NZG7 142 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 HAO1Q9UJM8 370 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 NAALADL1Q9UQQ1 740 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 TNRC6CQ9HCJ0 1690 aaKnown RBP13.23□□□□□ -0.29
PCM1-203ENST00000517545 TBX3O15119 743 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms