RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 PTENP60484 403 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 DSG1Q02413 1049 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 DSC1Q08554 894 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 MXD4Q14582 209 aaPredicted RBP16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 CDR2LQ86X02 465 aaPredicted RBP16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 SLC44A3Q8N4M1 653 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 ZNF707Q96C28 371 aaPredicted RBP16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 CCDC51Q96ER9 411 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 NAP1L4Q99733 375 aaKnown RBP16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 RXFP1Q9HBX9 757 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 XPNPEP1Q9NQW7 623 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 KLK14Q9P0G3 267 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 EPS15L1Q9UBC2 864 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 WNT16Q9UBV4 365 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 PARP2Q9UGN5 583 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 RIF1Q5UIP0 2472 aaKnown RBP16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 TBX3O15119 743 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 TGM5O43548 720 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 NPTXRO95502 500 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 SRFP11831 508 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 MBTD1Q05BQ5 628 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 CAPSQ13938 189 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 FUT10Q6P4F1 479 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 CYP26C1Q6V0L0 522 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 GPR152Q8TDT2 470 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 ASAP3Q8TDY4 903 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 HINFPQ9BQA5 517 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 GPR62Q9BZJ7 368 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 CACNG4Q9UBN1 327 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 GIT1Q9Y2X7 761 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 R4GN57 208 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 DMDP11532 3685 aa16.93■□□□□ 0.3
CSGALNACT1-204ENST00000517494 C2orf16Q68DN1 1984 aa16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 FAM205CA6NFA0 338 aa16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 B4GALT5O43286 388 aa16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 DCNP07585 359 aaKnown RBP16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 ARF4P18085 180 aaPredicted RBP16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 SCRN1Q12765 414 aa16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 PCBP1Q15365 356 aaKnown RBP eCLIP16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 USP41Q3LFD5 358 aa16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 SLFN12Q8IYM2 578 aa16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 RNF168Q8IYW5 571 aaPredicted RBP16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 HASPINQ8TF76 798 aa16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 EIF2AK1Q9BQI3 630 aaKnown RBP16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 NT5C3AQ9H0P0 336 aa16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 PLEKHA4Q9H4M7 779 aa16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 ARHGEF3Q9NR81 526 aa16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 ADAM28Q9UKQ2 775 aa16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 FAM186AA6NE01 2351 aa16.92■□□□□ 0.3
CSGALNACT1-204ENST00000517494 TADA2AO75478 443 aa16.91■□□□□ 0.3
CSGALNACT1-204ENST00000517494 SPIRE1Q08AE8 756 aa16.91■□□□□ 0.3
CSGALNACT1-204ENST00000517494 TMEM132AQ24JP5 1023 aa16.91■□□□□ 0.3
CSGALNACT1-204ENST00000517494 EARS2Q5JPH6 523 aaKnown RBP16.91■□□□□ 0.3
CSGALNACT1-204ENST00000517494 PRSS55Q6UWB4 352 aaPredicted RBP16.91■□□□□ 0.3
CSGALNACT1-204ENST00000517494 MAEAQ7L5Y9 396 aa16.91■□□□□ 0.3
CSGALNACT1-204ENST00000517494 PRKD2Q9BZL6 878 aa16.91■□□□□ 0.3
CSGALNACT1-204ENST00000517494 POLR3FQ9H1D9 316 aaPredicted RBP16.91■□□□□ 0.3
CSGALNACT1-204ENST00000517494 CHST7Q9NS84 486 aa16.91■□□□□ 0.3
CSGALNACT1-204ENST00000517494 ZDHHC7Q9NXF8 308 aa16.91■□□□□ 0.3
CSGALNACT1-204ENST00000517494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.91■□□□□ 0.31e-7■■■□□ 14.9
CSGALNACT1-204ENST00000517494 NUMBLQ9Y6R0 609 aa16.91■□□□□ 0.3
CSGALNACT1-204ENST00000517494 SPTBN4Q9H254 2564 aa16.91■□□□□ 0.3
CSGALNACT1-204ENST00000517494 A0A087WWV3 80 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 CASTOR2A6NHX0 329 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 LRRIQ4A6NIV6 560 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 USO1O60763 962 aaKnown RBP16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 SLITRK3O94933 977 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 EFEMP2O95967 443 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 LMNAP02545 664 aaKnown RBP16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 LAMP2P13473 410 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 GLRA2P23416 452 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 FSHRP23945 695 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 CREMQ03060 361 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 GRIK3Q13003 919 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 NR5A1Q13285 461 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 AMHR2Q16671 573 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 SLC27A1Q6PCB7 646 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 ERMP1Q7Z2K6 904 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 CEP57Q86XR8 500 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 HDAC7Q8WUI4 952 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 NXPE3Q969Y0 559 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 RHOBTB2Q9BYZ6 727 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 POLIQ9UNA4 740 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 SIT1Q9Y3P8 196 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 STK36Q9NRP7 1315 aa16.9■□□□□ 0.3
CSGALNACT1-204ENST00000517494 DGAT1O75907 488 aa16.89■□□□□ 0.29
CSGALNACT1-204ENST00000517494 KRT2P35908 639 aa16.89■□□□□ 0.29
CSGALNACT1-204ENST00000517494 ARL2P36404 184 aa16.89■□□□□ 0.29
CSGALNACT1-204ENST00000517494 FOSBP53539 338 aa16.89■□□□□ 0.29
CSGALNACT1-204ENST00000517494 HTR4Q13639 388 aa16.89■□□□□ 0.29
CSGALNACT1-204ENST00000517494 HSP90AA2PQ14568 343 aaPredicted RBP16.89■□□□□ 0.29
CSGALNACT1-204ENST00000517494 CALCRLQ16602 461 aa16.89■□□□□ 0.29
CSGALNACT1-204ENST00000517494 RTP2Q5QGT7 225 aa16.89■□□□□ 0.29
CSGALNACT1-204ENST00000517494 LIN9Q5TKA1 542 aa16.89■□□□□ 0.29
CSGALNACT1-204ENST00000517494 DCLRE1AQ6PJP8 1040 aa16.89■□□□□ 0.29
CSGALNACT1-204ENST00000517494 GRASPQ7Z6J2 395 aaPredicted RBP16.89■□□□□ 0.29
CSGALNACT1-204ENST00000517494 KIAA2013Q8IYS2 634 aa16.89■□□□□ 0.29
CSGALNACT1-204ENST00000517494 PIGOQ8TEQ8 1089 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms