RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 RIN2Q8WYP3 895 aaPredicted RBP4.44□□□□□ -1.7
SNORA40.12-201ENST00000516329 CEP95Q96GE4 821 aa4.44□□□□□ -1.7
SNORA40.12-201ENST00000516329 FAM193BQ96PV7 902 aaPredicted RBP4.44□□□□□ -1.7
SNORA40.12-201ENST00000516329 ACE2Q9BYF1 805 aaPredicted RBP4.44□□□□□ -1.7
SNORA40.12-201ENST00000516329 DMRT3Q9NQL9 472 aa4.44□□□□□ -1.7
SNORA40.12-201ENST00000516329 CCM2LQ9NUG4 571 aaPredicted RBP4.44□□□□□ -1.7
SNORA40.12-201ENST00000516329 TRPS1Q9UHF7 1281 aa4.44□□□□□ -1.7
SNORA40.12-201ENST00000516329 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.44□□□□□ -1.7
SNORA40.12-201ENST00000516329 RPTORQ8N122 1335 aa4.44□□□□□ -1.7
SNORA40.12-201ENST00000516329 GRXCR1A8MXD5 290 aa4.43□□□□□ -1.7
SNORA40.12-201ENST00000516329 MAKP20794 623 aa4.43□□□□□ -1.7
SNORA40.12-201ENST00000516329 PTPN7P35236 360 aa4.43□□□□□ -1.7
SNORA40.12-201ENST00000516329 MST1LQ2TV78 715 aa4.43□□□□□ -1.7
SNORA40.12-201ENST00000516329 NAIF1Q69YI7 327 aaPredicted RBP4.43□□□□□ -1.7
SNORA40.12-201ENST00000516329 BTNL9Q6UXG8 535 aa4.43□□□□□ -1.7
SNORA40.12-201ENST00000516329 DOK3Q7L591 496 aa4.43□□□□□ -1.7
SNORA40.12-201ENST00000516329 SLC25A43Q8WUT9 341 aaPredicted RBP4.43□□□□□ -1.7
SNORA40.12-201ENST00000516329 LARP4BQ92615 738 aaKnown RBP4.43□□□□□ -1.7
SNORA40.12-201ENST00000516329 PDCD2LQ9BRP1 358 aa4.43□□□□□ -1.7
SNORA40.12-201ENST00000516329 TRIM8Q9BZR9 551 aa4.43□□□□□ -1.7
SNORA40.12-201ENST00000516329 GPRC5BQ9NZH0 403 aa4.43□□□□□ -1.7
SNORA40.12-201ENST00000516329 LEFTY2O00292 366 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 MTHFD2P13995 350 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 ECHS1P30084 290 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 GPR3P46089 330 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 FAPQ12884 760 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 ADRM1Q16186 407 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 CSRP2Q16527 193 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 MFSD14BQ5SR56 506 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 RNF219Q5W0B1 726 aaPredicted RBP4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 PDZD4Q76G19 769 aaPredicted RBP4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 KCNK18Q7Z418 384 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 DDX42Q86XP3 938 aaKnown RBP eCLIP4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 TRMT2AQ8IZ69 625 aaKnown RBP4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 GPR156Q8NFN8 814 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 OR10H5Q8NGA6 315 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 PAWRQ96IZ0 340 aaKnown RBP4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 ORAI2Q96SN7 254 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 UHRF1Q96T88 793 aaPredicted RBP4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 NDC1Q9BTX1 674 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 KCNH6Q9H252 994 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 ZNF768Q9H5H4 540 aaKnown RBP4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 SPC25Q9HBM1 224 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 MCM8Q9UJA3 840 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 ZBTB21Q9ULJ3 1066 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 WASHC2AQ641Q2 1341 aa4.42□□□□□ -1.7
SNORA40.12-201ENST00000516329 AHRRA9YTQ3 701 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 B5MCH6 92 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 TRIM24O15164 1050 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 PHF2O75151 1096 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 RECQL4O94761 1208 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 PEX11BO96011 259 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 GASTP01350 101 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 NR4A1P22736 598 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 CRHR1P34998 444 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 PTGS2P35354 604 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 RNASE9P60153 205 aaKnown RBP4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 RAP2BP61225 183 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 ERVK-21P61565 698 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 FAM189BP81408 668 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 NOMO1Q15155 1222 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 MUM1L1Q5H9M0 696 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 Q6ZVL8 140 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 ZNF627Q7L945 461 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 GPRIN1Q7Z2K8 1008 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 SYT12Q8IV01 421 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 SYNE4Q8N205 404 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 SLC35B2Q8TB61 432 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 TFAP2CQ92754 450 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 FATE1Q969F0 183 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 SLC2A13Q96QE2 648 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 ADI1Q9BV57 179 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 LDAHQ9H6V9 325 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 TRPM5Q9NZQ8 1165 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 POGKQ9P215 609 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 DNM3Q9UQ16 869 aa4.41□□□□□ -1.7
SNORA40.12-201ENST00000516329 WNT10BO00744 389 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 FLT3LGP49771 235 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 SLC5A3P53794 718 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 PER3P56645 1201 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 NHLH2Q02577 135 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 PPP3CAQ08209 521 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 CLUL1Q15846 466 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 METTL24Q5JXM2 366 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 RNF187Q5TA31 235 aaPredicted RBP4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 MBNL2Q5VZF2 373 aaKnown RBP4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 EFCAB12Q6NXP0 572 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 AMOTL1Q8IY63 956 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 PQLC1Q8N2U9 271 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 CNTD1Q8N815 330 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 HAS1Q92839 578 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 PHACTR3Q96KR7 559 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 MLST8Q9BVC4 326 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 TEX101Q9BY14 249 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 GREM2Q9H772 168 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 RBM12Q9NTZ6 932 aaKnown RBP4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 PCDHGA2Q9Y5H1 932 aa4.4□□□□□ -1.71
SNORA40.12-201ENST00000516329 TBKBP1A7MCY6 615 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 CXorf49A8MYA2 514 aaPredicted RBP4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 MT-CO1P00395 513 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms