RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 HOXA2O43364 376 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 TOM1L1O75674 476 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 PPP1R37O75864 691 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 EOMESO95936 686 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 PIGRP01833 764 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 CASP5P51878 434 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 MRPS5P82675 430 aaKnown RBP16.51■□□□□ 0.23
PDCD6-211ENST00000515587 CAMK4Q16566 473 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 ZNF568Q3ZCX4 644 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 UBXN11Q5T124 520 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 FAM117BQ6P1L5 589 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 MPZL3Q6UWV2 235 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 CDR2LQ86X02 465 aaPredicted RBP16.51■□□□□ 0.23
PDCD6-211ENST00000515587 HERC6Q8IVU3 1022 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 GPT2Q8TD30 523 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 TOP1MTQ969P6 601 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 STRA6Q9BX79 667 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 C1QTNF1Q9BXJ1 281 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 ANKFY1Q9P2R3 1169 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 PCDHA5Q9Y5H7 936 aa16.51■□□□□ 0.23
PDCD6-211ENST00000515587 TTLL13PA6NNM8 815 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 CLDN3O15551 220 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 ZNF623O75123 536 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 PRPF6O94906 941 aaKnown RBP16.5■□□□□ 0.23
PDCD6-211ENST00000515587 EDN1P05305 212 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 MCF2P10911 925 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 ITGA4P13612 1032 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 EEF1DP3Q658K8 133 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 SLFN12LQ6IEE8 588 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 EPM2AIP1Q7L775 607 aaPredicted RBP16.5■□□□□ 0.23
PDCD6-211ENST00000515587 ZBTB33Q86T24 672 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 ABI1Q8IZP0 508 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 ZNF507Q8TCN5 953 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 EIF2AQ9BY44 585 aaKnown RBP16.5■□□□□ 0.23
PDCD6-211ENST00000515587 FGFBP2Q9BYJ0 223 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 UBN1Q9NPG3 1134 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 PIEZO1Q92508 2521 aa16.5■□□□□ 0.23
PDCD6-211ENST00000515587 TLL1O43897 1013 aa16.49■□□□□ 0.23
PDCD6-211ENST00000515587 GJB5O95377 273 aa16.49■□□□□ 0.23
PDCD6-211ENST00000515587 HARSP12081 509 aaKnown RBP16.49■□□□□ 0.23
PDCD6-211ENST00000515587 STK4Q13043 487 aa16.49■□□□□ 0.23
PDCD6-211ENST00000515587 NOLC1Q14978 699 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDCD6-211ENST00000515587 CCDC85BQ15834 202 aaPredicted RBP16.49■□□□□ 0.23
PDCD6-211ENST00000515587 MRPL10Q7Z7H8 261 aaKnown RBP16.49■□□□□ 0.23
PDCD6-211ENST00000515587 GLIS3Q8NEA6 775 aa16.49■□□□□ 0.23
PDCD6-211ENST00000515587 SPATA20Q8TB22 786 aa16.49■□□□□ 0.23
PDCD6-211ENST00000515587 ERCC4Q92889 916 aaPredicted RBP16.49■□□□□ 0.23
PDCD6-211ENST00000515587 YME1L1Q96TA2 773 aa16.49■□□□□ 0.23
PDCD6-211ENST00000515587 APOL6Q9BWW8 343 aa16.49■□□□□ 0.23
PDCD6-211ENST00000515587 KIAA1468Q9P260 1216 aa16.49■□□□□ 0.23
PDCD6-211ENST00000515587 IPPQ9Y573 584 aa16.49■□□□□ 0.23
PDCD6-211ENST00000515587 BDP1A6H8Y1 2624 aa16.49■□□□□ 0.23
PDCD6-211ENST00000515587 PROZP22891 400 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 KCNA1Q09470 495 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 STIM1Q13586 685 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 RAB30Q15771 203 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 KYAT1Q16773 422 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 BMT2Q1RMZ1 405 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 ZNF658Q5TYW1 1059 aaPredicted RBP16.48■□□□□ 0.23
PDCD6-211ENST00000515587 GLB1LQ6UWU2 654 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 HS2ST1Q7LGA3 356 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 TMCO2Q7Z6W1 182 aaPredicted RBP16.48■□□□□ 0.23
PDCD6-211ENST00000515587 NELFCDQ8IXH7 590 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 KIAA0895Q8NCT3 520 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 SCFD1Q8WVM8 642 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 RSPH1Q8WYR4 309 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 POMGNT1Q8WZA1 660 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 SYAP1Q96A49 352 aaPredicted RBP16.48■□□□□ 0.23
PDCD6-211ENST00000515587 TIFAQ96CG3 184 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 RAD9AQ99638 391 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 LRFN3Q9BTN0 628 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 CCDC94Q9BW85 323 aaPredicted RBP16.48■□□□□ 0.23
PDCD6-211ENST00000515587 GBP3Q9H0R5 595 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 CDT1Q9H211 546 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 PRDM12Q9H4Q4 367 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 PTPRHQ9HD43 1115 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 MSRAQ9UJ68 235 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 HCN4Q9Y3Q4 1203 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 INSL6Q9Y581 213 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 CITO14578 2027 aa16.48■□□□□ 0.23
PDCD6-211ENST00000515587 FNDC1Q4ZHG4 1894 aaPredicted RBP16.48■□□□□ 0.23
PDCD6-211ENST00000515587 YARSP54577 528 aaKnown RBP16.47■□□□□ 0.23
PDCD6-211ENST00000515587 SNRPFP62306 86 aaKnown RBP16.47■□□□□ 0.23
PDCD6-211ENST00000515587 MCL1Q07820 350 aa16.47■□□□□ 0.23
PDCD6-211ENST00000515587 KNOP1Q1ED39 458 aaKnown RBP16.47■□□□□ 0.23
PDCD6-211ENST00000515587 ZNF598Q86UK7 904 aaKnown RBP16.47■□□□□ 0.23
PDCD6-211ENST00000515587 SMG8Q8ND04 991 aaKnown RBP16.47■□□□□ 0.23
PDCD6-211ENST00000515587 GOLGA5Q8TBA6 731 aa16.47■□□□□ 0.23
PDCD6-211ENST00000515587 ZBTB45Q96K62 511 aaPredicted RBP16.47■□□□□ 0.23
PDCD6-211ENST00000515587 GAS2L1Q99501 681 aaPredicted RBP16.47■□□□□ 0.23
PDCD6-211ENST00000515587 MSTO1Q9BUK6 570 aa16.47■□□□□ 0.23
PDCD6-211ENST00000515587 NXF3Q9H4D5 531 aaKnown RBP16.47■□□□□ 0.23
PDCD6-211ENST00000515587 CGNQ9P2M7 1197 aaKnown RBP16.47■□□□□ 0.23
PDCD6-211ENST00000515587 PARP2Q9UGN5 583 aa16.47■□□□□ 0.23
PDCD6-211ENST00000515587 MAN1B1Q9UKM7 699 aa16.47■□□□□ 0.23
PDCD6-211ENST00000515587 GDAQ9Y2T3 454 aa16.47■□□□□ 0.23
PDCD6-211ENST00000515587 ARIH1Q9Y4X5 557 aaPredicted RBP16.47■□□□□ 0.23
PDCD6-211ENST00000515587 PCDHA11Q9Y5I1 949 aa16.47■□□□□ 0.23
PDCD6-211ENST00000515587 A0A0B4J269 797 aa16.46■□□□□ 0.23
PDCD6-211ENST00000515587 GRXCR1A8MXD5 290 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms