RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 SCOCQ9UIL1 159 aa6.44□□□□□ -1.38
SMARCA5-203ENST00000515531 SPEF1Q9Y4P9 236 aa6.44□□□□□ -1.38
SMARCA5-203ENST00000515531 ACRV1P26436 265 aa6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 EXOSC10Q01780 885 aaKnown RBP6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 CNGB1Q14028 1251 aaPredicted RBP6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 CDSNQ15517 529 aa6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 ZXDCQ2QGD7 858 aaPredicted RBP6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 MST1LQ2TV78 715 aa6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 NRN1LQ496H8 165 aa6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 USP39Q53GS9 565 aaKnown RBP6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 BRDTQ58F21 947 aaPredicted RBP6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 MB21D1Q8N884 522 aa6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 ASPSCR1Q9BZE9 553 aa6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 AURKAIP1Q9NWT8 199 aaPredicted RBP6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 SAP30BPQ9UHR5 308 aaKnown RBP6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 ZMYM3Q14202 1370 aa6.43□□□□□ -1.38
SMARCA5-203ENST00000515531 C1QTNF3-AMACRE9PGA6 284 aa6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 MAN2A2P49641 1150 aa6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 SLC16A1P53985 500 aa6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 PCBP2Q15366 365 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 Q6ZVL8 140 aa6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 C1orf210Q8IVY1 113 aa6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 RPUSD2Q8IZ73 545 aaKnown RBP6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 MDGA1Q8NFP4 955 aa6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 OR7D4Q8NG98 312 aa6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 JADE3Q92613 823 aa6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 GPR87Q9BY21 358 aa6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 BCO1Q9HAY6 547 aa6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 TRPS1Q9UHF7 1281 aa6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 MYRFQ9Y2G1 1151 aa6.42□□□□□ -1.38
SMARCA5-203ENST00000515531 FAM171A2A8MVW0 826 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 GOLGA6L6A8MZA4 724 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 PRR5-ARHGAP8B1AHC4 643 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 NDUFS2O75306 463 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 ENDOD1O94919 500 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 HK1P19367 917 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 KRT85P78386 507 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 PPP3CAQ08209 521 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 RRP1BQ14684 758 aaKnown RBP6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 PRAMEF14Q5SWL7 426 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 EFCAB2Q5VUJ9 269 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 SPRED1Q7Z699 444 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 XYLT1Q86Y38 959 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 PQLC1Q8N2U9 271 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 LILRA3Q8N6C8 439 aaPredicted RBP6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 EXTL1Q92935 676 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 CEP89Q96ST8 783 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 PDCD2LQ9BRP1 358 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 INTUQ9ULD6 942 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 CLCA2Q9UQC9 943 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 TNKSO95271 1327 aa6.41□□□□□ -1.38
SMARCA5-203ENST00000515531 PCDHGA12O60330 932 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 MGAT2Q10469 447 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 PUM1Q14671 1186 aaKnown RBP eCLIP6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 Q6ZRM9 215 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 DOK3Q7L591 496 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 REPS2Q8NFH8 660 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 NRG4Q8WWG1 115 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 PGBD4Q96DM1 585 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 MNTQ99583 582 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 C7orf25Q9BPX7 421 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 SLC13A1Q9BZW2 595 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 SENP6Q9GZR1 1112 aaPredicted RBP6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 SPON1Q9HCB6 807 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 LANCL2Q9NS86 450 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 TYW1Q9NV66 732 aaKnown RBP6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 PCDHGA9Q9Y5G4 932 aaKnown RBP6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 PCDHGA8Q9Y5G5 932 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 PCDHGA7Q9Y5G6 932 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 PCDHGA6Q9Y5G7 932 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 PCDHGA3Q9Y5H0 932 aa6.4□□□□□ -1.38
SMARCA5-203ENST00000515531 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 B5MCH6 92 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 ADCY6O43306 1168 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 SNUPNO95149 360 aaKnown RBP6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 IL2RBP14784 551 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 C5AR1P21730 350 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 SREBF1P36956 1147 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 FLT3LGP49771 235 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 SCNN1GP51170 649 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 PTH1RQ03431 593 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 DCAF17Q5H9S7 520 aaPredicted RBP6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 DPF2Q92785 391 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 TEKT5Q96M29 485 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 PLEKHG4BQ96PX9 1271 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 TMEM140Q9NV12 185 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 PARPBPQ9NWS1 579 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 MOCS1Q9NZB8 636 aa6.39□□□□□ -1.39
SMARCA5-203ENST00000515531 FZD9O00144 591 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 RABGGTBP53611 331 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 FAM47AQ5JRC9 791 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 METTL24Q5JXM2 366 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 EFCAB12Q6NXP0 572 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 RNF207Q6ZRF8 634 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 MIGA2Q7L4E1 593 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 ZBTB46Q86UZ6 589 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 TMPRSS6Q8IU80 811 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 RHOT1Q8IXI2 618 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 TRMT2AQ8IZ69 625 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms