RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 KANSL3Q9P2N6 904 aa14.41□□□□□ -0.1
CDK7-213ENST00000515391 CACNG4Q9UBN1 327 aa14.41□□□□□ -0.1
CDK7-213ENST00000515391 MTMR6Q9Y217 621 aa14.41□□□□□ -0.1
CDK7-213ENST00000515391 PRG3Q9Y2Y8 225 aaPredicted RBP14.41□□□□□ -0.1
CDK7-213ENST00000515391 TDRD15B5MCY1 1934 aaKnown RBP14.41□□□□□ -0.1
CDK7-213ENST00000515391 TTC28Q96AY4 2481 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 K7ERI5 159 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 N4BP3O15049 544 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 PLA2G4BP0C869 781 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 UBA7P41226 1012 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 OR1G1P47890 313 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 SLC12A3P55017 1021 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 KARSQ15046 597 aaKnown RBP14.4□□□□□ -0.1
CDK7-213ENST00000515391 PTPAQ15257 358 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 PUS10Q3MIT2 529 aaKnown RBP14.4□□□□□ -0.1
CDK7-213ENST00000515391 TAS1R3Q7RTX0 852 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 DDX53Q86TM3 631 aaKnown RBP14.4□□□□□ -0.1
CDK7-213ENST00000515391 HACE1Q8IYU2 909 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 RSPH1Q8WYR4 309 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 TMEM175Q9BSA9 504 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 NT5C3AQ9H0P0 336 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 MARCH5Q9NX47 278 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 GIT1Q9Y2X7 761 aa14.4□□□□□ -0.1
CDK7-213ENST00000515391 INPPL1O15357 1258 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 SLC16A4O15374 487 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 CLASP2O75122 1294 aaKnown RBP14.39□□□□□ -0.11
CDK7-213ENST00000515391 EFNA5P52803 228 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 DSC1Q08554 894 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 SMAD4Q13485 552 aaKnown RBP14.39□□□□□ -0.11
CDK7-213ENST00000515391 KCNC3Q14003 757 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 ATF7IP2Q5U623 682 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 USP49Q70CQ1 688 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 TAS1R1Q7RTX1 841 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 SNX21Q969T3 373 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 CALML4Q96GE6 196 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 CDCA3Q99618 268 aaPredicted RBP14.39□□□□□ -0.11
CDK7-213ENST00000515391 EPHX3Q9H6B9 360 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 KMT5AQ9NQR1 393 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 BLOC1S4Q9NUP1 217 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 GDAQ9Y2T3 454 aa14.39□□□□□ -0.11
CDK7-213ENST00000515391 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.38□□□□□ -0.11
CDK7-213ENST00000515391 STX6O43752 255 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 RECQL4O94761 1208 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 BMP15O95972 392 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 CTSAP10619 480 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 PLCG1P19174 1290 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 GUCY2CP25092 1073 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 SSTR3P32745 418 aaPredicted RBP14.38□□□□□ -0.11
CDK7-213ENST00000515391 LONP1P36776 959 aaKnown RBP14.38□□□□□ -0.11
CDK7-213ENST00000515391 DMP1Q13316 513 aaPredicted RBP14.38□□□□□ -0.11
CDK7-213ENST00000515391 MCM6Q14566 821 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 SMAD2Q15796 467 aaKnown RBP14.38□□□□□ -0.11
CDK7-213ENST00000515391 ARSHQ5FYA8 562 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 FOXD4L5Q5VV16 416 aaPredicted RBP14.38□□□□□ -0.11
CDK7-213ENST00000515391 ZBTB33Q86T24 672 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 GJD3Q8N144 294 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 SPRYD3Q8NCJ5 442 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 FOXD4L4Q8WXT5 416 aaPredicted RBP14.38□□□□□ -0.11
CDK7-213ENST00000515391 EPSTI1Q96J88 318 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 AK8Q96MA6 479 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 DRC1Q96MC2 740 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 CLIC6Q96NY7 704 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 USP28Q96RU2 1077 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 RPS6KC1Q96S38 1066 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 ADPGKQ9BRR6 497 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 TARS2Q9BW92 718 aaKnown RBP14.38□□□□□ -0.11
CDK7-213ENST00000515391 ARHGAP28Q9P2N2 729 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 CDH22Q9UJ99 828 aa14.38□□□□□ -0.11
CDK7-213ENST00000515391 FBXO2Q9UK22 296 aaPredicted RBP14.38□□□□□ -0.11
CDK7-213ENST00000515391 MYH11P35749 1972 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 C2CD2LO14523 706 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 PTGESO14684 152 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 ZP2Q05996 745 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 COASYQ13057 564 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 PTPN14Q15678 1187 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 ANKRD54Q6NXT1 300 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 KANK3Q6NY19 840 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 SYCE2Q6PIF2 218 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 GPBP1Q86WP2 473 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 CEP120Q8N960 986 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 SMRP1Q8NCR6 262 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 RASSF8Q8NHQ8 419 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 ZBTB45Q96K62 511 aaPredicted RBP14.37□□□□□ -0.11
CDK7-213ENST00000515391 B3GALT6Q96L58 329 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 ACO2Q99798 780 aaKnown RBP14.37□□□□□ -0.11
CDK7-213ENST00000515391 PAAF1Q9BRP4 392 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 TMEM134Q9H6X4 195 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 FAM50BQ9Y247 325 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 USP15Q9Y4E8 981 aaPredicted RBP14.37□□□□□ -0.11
CDK7-213ENST00000515391 HCFC2Q9Y5Z7 792 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 PHLPP2Q6ZVD8 1323 aa14.37□□□□□ -0.11
CDK7-213ENST00000515391 CASTOR2A6NHX0 329 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 PLS3P13797 630 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 EPCAMP16422 314 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 IGFBP6P24592 240 aaPredicted RBP14.36□□□□□ -0.11
CDK7-213ENST00000515391 OSTNP61366 133 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 GRIK3Q13003 919 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 BMS1Q14692 1282 aaKnown RBP14.36□□□□□ -0.11
CDK7-213ENST00000515391 GLRA4Q5JXX5 417 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 TMEM184AQ6ZMB5 413 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms