RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 PSMD2Q13200 908 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 SNW1Q13573 536 aaKnown RBP15.63■□□□□ 0.09
NUP54-216ENST00000514901 KYAT1Q16773 422 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 PAN2Q504Q3 1202 aaKnown RBP15.63■□□□□ 0.09
NUP54-216ENST00000514901 EEF1DP3Q658K8 133 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 SLFN12LQ6IEE8 588 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 TMEM192Q8IY95 271 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 LRRC43Q8N309 656 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 ENGASEQ8NFI3 743 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 CCDC47Q96A33 483 aaKnown RBP15.63■□□□□ 0.09
NUP54-216ENST00000514901 ACCSQ96QU6 501 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 BLZF1Q9H2G9 400 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 NXF3Q9H4D5 531 aaKnown RBP15.63■□□□□ 0.09
NUP54-216ENST00000514901 TMEM206Q9H813 350 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 TYW1Q9NV66 732 aaKnown RBP15.63■□□□□ 0.09
NUP54-216ENST00000514901 TBC1D7Q9P0N9 293 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 MRPL42Q9Y6G3 142 aaKnown RBP15.63■□□□□ 0.09
NUP54-216ENST00000514901 FNDC1Q4ZHG4 1894 aaPredicted RBP15.63■□□□□ 0.09
NUP54-216ENST00000514901 CHD7Q9P2D1 2997 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.62■□□□□ 0.09
NUP54-216ENST00000514901 HNRNPDLO14979 420 aaKnown RBP15.62■□□□□ 0.09
NUP54-216ENST00000514901 INPPL1O15357 1258 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 ARHGEF15O94989 841 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 MCL1Q07820 350 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 POSTNQ15063 836 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 ZNF568Q3ZCX4 644 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 EPC2Q52LR7 807 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 ZC2HC1CQ53FD0 456 aaPredicted RBP15.62■□□□□ 0.09
NUP54-216ENST00000514901 FAM26FQ5R3K3 315 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 SPOUT1Q5T280 376 aaKnown RBP15.62■□□□□ 0.09
NUP54-216ENST00000514901 L1TD1Q5T7N2 865 aaKnown RBP15.62■□□□□ 0.09
NUP54-216ENST00000514901 ELOA2Q8IYF1 753 aaPredicted RBP15.62■□□□□ 0.09
NUP54-216ENST00000514901 GRAMD1CQ8IYS0 662 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 ARNTL2Q8WYA1 636 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 GBP4Q96PP9 640 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 RNF39Q9H2S5 420 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 MTMR10Q9NXD2 777 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 PARP2Q9UGN5 583 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 HES2Q9Y543 173 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 PCDHB12Q9Y5F1 795 aa15.62■□□□□ 0.09
NUP54-216ENST00000514901 ARL5CA6NH57 179 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 MEIS3P2A8K0S8 358 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 C5orf67F2Z3F1 127 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 ABLIM1O14639 778 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 EIF3DO15371 548 aaKnown RBP eCLIP15.61■□□□□ 0.09
NUP54-216ENST00000514901 LAG3P18627 525 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 GRM5P41594 1212 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 MATR3P43243 847 aaKnown RBP eCLIP15.61■□□□□ 0.09
NUP54-216ENST00000514901 EHHADHQ08426 723 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 GRIN2CQ14957 1233 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 NOLC1Q14978 699 aaKnown RBP eCLIP15.61■□□□□ 0.09
NUP54-216ENST00000514901 LRRC55Q6ZSA7 311 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 Q7L0L9 218 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 ZBTB33Q86T24 672 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 SYCP3Q8IZU3 236 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 FBXO22Q8NEZ5 403 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 FAM161BQ96MY7 647 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 FAM193BQ96PV7 902 aaPredicted RBP15.61■□□□□ 0.09
NUP54-216ENST00000514901 GAD1Q99259 594 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 CCDC94Q9BW85 323 aaPredicted RBP15.61■□□□□ 0.09
NUP54-216ENST00000514901 APOL6Q9BWW8 343 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 CDT1Q9H211 546 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 EXOC1Q9NV70 894 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 SNTG2Q9NY99 539 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 INPP5FQ9Y2H2 1132 aa15.61■□□□□ 0.09
NUP54-216ENST00000514901 KLRC4O43908 158 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 KINO60870 393 aaKnown RBP15.6■□□□□ 0.09
NUP54-216ENST00000514901 GADD45BO75293 160 aaPredicted RBP15.6■□□□□ 0.09
NUP54-216ENST00000514901 PRPF40AO75400 957 aaKnown RBP15.6■□□□□ 0.09
NUP54-216ENST00000514901 LINC00271P0C7V0 271 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 MYBP10242 640 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 AKAP5P24588 427 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 CASP1P29466 404 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 CTNNB1P35222 781 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 YARSP54577 528 aaKnown RBP15.6■□□□□ 0.09
NUP54-216ENST00000514901 RNASELQ05823 741 aaKnown RBP15.6■□□□□ 0.09
NUP54-216ENST00000514901 DPYDQ12882 1025 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 ZNF507Q8TCN5 953 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 P2RX5Q93086 422 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 ZBTB45Q96K62 511 aaPredicted RBP15.6■□□□□ 0.09
NUP54-216ENST00000514901 ACAP3Q96P50 834 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 RPS6KC1Q96S38 1066 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 GAS2L1Q99501 681 aaPredicted RBP15.6■□□□□ 0.09
NUP54-216ENST00000514901 C17orf80Q9BSJ5 609 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 C11orf84Q9BUA3 381 aaPredicted RBP15.6■□□□□ 0.09
NUP54-216ENST00000514901 CWH43Q9H720 699 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 CERS4Q9HA82 394 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 TOPORSQ9NS56 1045 aaPredicted RBP15.6■□□□□ 0.09
NUP54-216ENST00000514901 TBC1D13Q9NVG8 400 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 ANKFY1Q9P2R3 1169 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 STYXL1Q9Y6J8 313 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 UBE4BO95155 1302 aa15.6■□□□□ 0.09
NUP54-216ENST00000514901 A0A0B4J269 797 aa15.59■□□□□ 0.09
NUP54-216ENST00000514901 H3BNC9 293 aa15.59■□□□□ 0.09
NUP54-216ENST00000514901 NR1I2O75469 434 aa15.59■□□□□ 0.09
NUP54-216ENST00000514901 RECQL4O94761 1208 aa15.59■□□□□ 0.09
NUP54-216ENST00000514901 RPN1P04843 607 aaKnown RBP15.59■□□□□ 0.09
NUP54-216ENST00000514901 CLTAP09496 248 aa15.59■□□□□ 0.09
NUP54-216ENST00000514901 PPM1AP35813 382 aa15.59■□□□□ 0.09
NUP54-216ENST00000514901 MLH1P40692 756 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms