RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 SLC7A5Q01650 507 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 CLEC16AQ2KHT3 1053 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 KIAA1755Q5JYT7 1200 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 DPH6Q7L8W6 267 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 OTOP1Q7RTM1 612 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 CCDC84Q86UT8 332 aaPredicted RBP8.02□□□□□ -1.13
CLIP1-205ENST00000514271 ZKSCAN3Q9BRR0 538 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 GPCPD1Q9NPB8 672 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 BATF3Q9NR55 127 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 AAASQ9NRG9 546 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 AJAP1Q9UKB5 411 aaPredicted RBP8.02□□□□□ -1.13
CLIP1-205ENST00000514271 ZMYM2Q9UBW7 1377 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 CFAP69A5D8W1 941 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 NCK2O43639 380 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 MTA2O94776 668 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 SCG2P13521 617 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 CTNNA2P26232 953 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 HSD17B4P51659 736 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 NKX3-2P78367 333 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 HTRA3P83110 453 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 CYP27A1Q02318 531 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 CTC1Q2NKJ3 1217 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 KCTD1Q719H9 257 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 CCDC50Q8IVM0 306 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 TTC30BQ8N4P2 665 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 NUP133Q8WUM0 1156 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 ITFG2Q969R8 447 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 STRA6Q9BX79 667 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 DEF6Q9H4E7 631 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 VTA1Q9NP79 307 aa8.02□□□□□ -1.13
CLIP1-205ENST00000514271 FAM155BO75949 473 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 IGHA2P01877 340 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 CYLC1P35663 651 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 EIF4A3P38919 411 aaKnown RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 SHROOM1Q2M3G4 852 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 QRICH1Q2TAL8 776 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 C4orf46Q504U0 113 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 FOXB2Q5VYV0 432 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 NIPA1Q7RTP0 329 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 NT5DC3Q86UY8 548 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 SPICE1Q8N0Z3 855 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 CMTR1Q8N1G2 835 aaKnown RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 CD99L2Q8TCZ2 262 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 RAET1EQ8TD07 263 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 RNF25Q96BH1 459 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 CDHR1Q96JP9 859 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 C6orf50Q9HD87 102 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 NLRC4Q9NPP4 1024 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 SUCLA2Q9P2R7 463 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 GJD2Q9UKL4 321 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 NFU1Q9UMS0 254 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 NUMBLQ9Y6R0 609 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 FRMPD3Q5JV73 1810 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 EME2A4GXA9 379 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 C19orf67A6NJJ6 358 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 SLURP2P0DP57 97 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 IDEP14735 1019 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 KLRC1P26715 233 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 LBX1P52954 281 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 LRRC63Q05C16 580 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 SPIRE1Q08AE8 756 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 PDIA5Q14554 519 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 ZNF792Q3KQV3 632 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 NCAPG2Q86XI2 1143 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 BARHL2Q9NY43 387 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 PLAAQ9Y263 795 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 POTEFA5A3E0 1075 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 CCT8L1PA6NM43 557 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 GCOM1H8Y6P7 765 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 POLR2MP0CAP2 368 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 PAX7P23759 505 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 SLC18A1P54219 525 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 PPP2R2AP63151 447 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 IRX1P78414 480 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 GNL2Q13823 731 aaKnown RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 FILIP1LQ4L180 1135 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 IQCEQ6IPM2 695 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 POTEEQ6S8J3 1075 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 MOXD1Q6UVY6 613 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 CLEC10AQ8IUN9 316 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 FAM133AQ8N9E0 248 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 CCDC43Q96MW1 224 aaKnown RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 NUP88Q99567 741 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 RIC8AQ9NPQ8 531 aa8.01□□□□□ -1.13
CLIP1-205ENST00000514271 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 FBXO9Q9UK97 447 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-205ENST00000514271 GM2AP17900 193 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 IVDP26440 423 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 AFMP43652 599 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 ADCY2Q08462 1091 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 MAN2A1Q16706 1144 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 RRAGBQ5VZM2 374 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 IFT20Q8IY31 132 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 FGFBP2Q9BYJ0 223 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 IRF2BPLQ9H1B7 796 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 SLITRK6Q9H5Y7 841 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 PLSCR2Q9NRY7 297 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 TRIM17Q9Y577 477 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 FRMPD2Q68DX3 1309 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms