RNA–Protein interactions for RNA: ENST00000514118.5

AP3S1-207, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-207ENST00000514118 DDX53Q86TM3 631 aaKnown RBP12.78□□□□□ -0.36
AP3S1-207ENST00000514118 GPBP1Q86WP2 473 aa12.78□□□□□ -0.36
AP3S1-207ENST00000514118 KRI1Q8N9T8 703 aaKnown RBP12.78□□□□□ -0.36
AP3S1-207ENST00000514118 LINC00301Q8NCQ3 95 aa12.78□□□□□ -0.36
AP3S1-207ENST00000514118 TMEM161BQ8NDZ6 487 aa12.78□□□□□ -0.36
AP3S1-207ENST00000514118 RASSF8Q8NHQ8 419 aa12.78□□□□□ -0.36
AP3S1-207ENST00000514118 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.78□□□□□ -0.36
AP3S1-207ENST00000514118 MICAL1Q8TDZ2 1067 aa12.78□□□□□ -0.36
AP3S1-207ENST00000514118 BCL7CQ8WUZ0 217 aaPredicted RBP12.78□□□□□ -0.36
AP3S1-207ENST00000514118 LARP4BQ92615 738 aaKnown RBP12.78□□□□□ -0.36
AP3S1-207ENST00000514118 EPSTI1Q96J88 318 aa12.78□□□□□ -0.36
AP3S1-207ENST00000514118 ZFP42Q96MM3 310 aa12.78□□□□□ -0.36
AP3S1-207ENST00000514118 ZNF396Q96N95 335 aaPredicted RBP12.78□□□□□ -0.36
AP3S1-207ENST00000514118 TCF25Q9BQ70 676 aa12.78□□□□□ -0.36
AP3S1-207ENST00000514118 ZBP1Q9H171 429 aa12.78□□□□□ -0.36
AP3S1-207ENST00000514118 TLE6Q9H808 572 aa12.78□□□□□ -0.36
AP3S1-207ENST00000514118 ENTPD7Q9NQZ7 604 aa12.78□□□□□ -0.36
AP3S1-207ENST00000514118 MIOSQ9NXC5 875 aa12.78□□□□□ -0.36
AP3S1-207ENST00000514118 LARSQ9P2J5 1176 aaKnown RBP12.78□□□□□ -0.36
AP3S1-207ENST00000514118 STK39Q9UEW8 545 aa12.78□□□□□ -0.36
AP3S1-207ENST00000514118 TCF20Q9UGU0 1960 aaKnown RBP12.78□□□□□ -0.36
AP3S1-207ENST00000514118 NCOR1O75376 2440 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 H0YCG3 227 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 SLC16A4O15374 487 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 RECQL4O94761 1208 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 YEATS4O95619 227 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 F13A1P00488 732 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 ALDH2P05091 517 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 TXLNAP40222 546 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 ZNF131P52739 623 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 SMTNP53814 917 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 RAD51AP2Q09MP3 1159 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 SMC1AQ14683 1233 aaKnown RBP12.77□□□□□ -0.37
AP3S1-207ENST00000514118 BMS1Q14692 1282 aaKnown RBP12.77□□□□□ -0.37
AP3S1-207ENST00000514118 SPECC1Q5M775 1068 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 PLPP4Q5VZY2 271 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 TMC7Q7Z402 723 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 CLIC6Q96NY7 704 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 RPS6KC1Q96S38 1066 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 UHRF1Q96T88 793 aaPredicted RBP12.77□□□□□ -0.37
AP3S1-207ENST00000514118 ACO2Q99798 780 aaKnown RBP12.77□□□□□ -0.37
AP3S1-207ENST00000514118 REEP2Q9BRK0 252 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 MRPL4Q9BYD3 311 aaKnown RBP12.77□□□□□ -0.37
AP3S1-207ENST00000514118 IGFLR1Q9H665 355 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 PTPRHQ9HD43 1115 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 CCDC39Q9UFE4 941 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 PARP2Q9UGN5 583 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 USP20Q9Y2K6 914 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 FAN1Q9Y2M0 1017 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 IRAK3Q9Y616 596 aa12.77□□□□□ -0.37
AP3S1-207ENST00000514118 TDRD15B5MCY1 1934 aaKnown RBP12.77□□□□□ -0.37
AP3S1-207ENST00000514118 NPHP3-ACAD11A0A0J9YXS1 232 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 GRXCR2A6NFK2 248 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 C2orf71A6NGG8 1288 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 HIDE1A8MVS5 230 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 H3BQ06 376 aaPredicted RBP12.76□□□□□ -0.37
AP3S1-207ENST00000514118 ABLIM1O14639 778 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 NRP1O14786 923 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 SPTLC2O15270 562 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 LINC01565O15544 149 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 PPP6R2O75170 966 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 BRD1O95696 1058 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 GLP2RO95838 553 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 CTSAP10619 480 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 MAPTP10636 758 aaKnown RBP12.76□□□□□ -0.37
AP3S1-207ENST00000514118 SCP2P22307 547 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 PROZP22891 400 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 DDIT3P35638 169 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 NCKAP1LP55160 1127 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 CACNB1Q02641 598 aaPredicted RBP12.76□□□□□ -0.37
AP3S1-207ENST00000514118 DLX2Q07687 328 aaPredicted RBP12.76□□□□□ -0.37
AP3S1-207ENST00000514118 KCNC3Q14003 757 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 GIT2Q14161 759 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 STK38Q15208 465 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 PTCRAQ6ISU1 281 aaPredicted RBP12.76□□□□□ -0.37
AP3S1-207ENST00000514118 EP400NLQ6ZTU2 488 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 RBM23Q86U06 439 aaKnown RBP12.76□□□□□ -0.37
AP3S1-207ENST00000514118 RNF168Q8IYW5 571 aaPredicted RBP12.76□□□□□ -0.37
AP3S1-207ENST00000514118 VPS52Q8N1B4 723 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 MRPL43Q8N983 215 aaKnown RBP12.76□□□□□ -0.37
AP3S1-207ENST00000514118 MSLNLQ96KJ4 702 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 TARS2Q9BW92 718 aaKnown RBP12.76□□□□□ -0.37
AP3S1-207ENST00000514118 VN1R3Q9BXE9 311 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 CDT1Q9H211 546 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 MARCH5Q9NX47 278 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 SNTG2Q9NY99 539 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 CUL9Q8IWT3 2517 aa12.76□□□□□ -0.37
AP3S1-207ENST00000514118 XIRP2A4UGR9 3374 aa12.75□□□□□ -0.37
AP3S1-207ENST00000514118 PTGESO14684 152 aa12.75□□□□□ -0.37
AP3S1-207ENST00000514118 PER2O15055 1255 aa12.75□□□□□ -0.37
AP3S1-207ENST00000514118 FAM13AO94988 1023 aa12.75□□□□□ -0.37
AP3S1-207ENST00000514118 EFEMP2O95967 443 aa12.75□□□□□ -0.37
AP3S1-207ENST00000514118 GRM5P41594 1212 aa12.75□□□□□ -0.37
AP3S1-207ENST00000514118 NDUFV1P49821 464 aa12.75□□□□□ -0.37
AP3S1-207ENST00000514118 STRN3Q13033 797 aa12.75□□□□□ -0.37
AP3S1-207ENST00000514118 COASYQ13057 564 aa12.75□□□□□ -0.37
AP3S1-207ENST00000514118 SMAD4Q13485 552 aaKnown RBP12.75□□□□□ -0.37
AP3S1-207ENST00000514118 PKP1Q13835 747 aa12.75□□□□□ -0.37
AP3S1-207ENST00000514118 DHX8Q14562 1220 aaKnown RBP12.75□□□□□ -0.37
AP3S1-207ENST00000514118 ZNF568Q3ZCX4 644 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms