RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 PMS1P54277 932 aaKnown RBP12.4□□□□□ -0.42
HTT-213ENST00000513806 NCBP1Q09161 790 aaKnown RBP12.4□□□□□ -0.42
HTT-213ENST00000513806 MPZL3Q6UWV2 235 aa12.4□□□□□ -0.42
HTT-213ENST00000513806 AGMOQ6ZNB7 445 aa12.4□□□□□ -0.42
HTT-213ENST00000513806 SLC24A5Q71RS6 500 aa12.4□□□□□ -0.42
HTT-213ENST00000513806 HVCN1Q96D96 273 aa12.4□□□□□ -0.42
HTT-213ENST00000513806 FAM84AQ96KN4 292 aa12.4□□□□□ -0.42
HTT-213ENST00000513806 TRIM6Q9C030 488 aaPredicted RBP12.4□□□□□ -0.42
HTT-213ENST00000513806 SEMA6BQ9H3T3 888 aa12.4□□□□□ -0.42
HTT-213ENST00000513806 CHST12Q9NRB3 414 aa12.4□□□□□ -0.42
HTT-213ENST00000513806 RMND1Q9NWS8 449 aa12.4□□□□□ -0.42
HTT-213ENST00000513806 CTNND2Q9UQB3 1225 aa12.4□□□□□ -0.42
HTT-213ENST00000513806 SLC4A7Q9Y6M7 1214 aa12.4□□□□□ -0.42
HTT-213ENST00000513806 A0A0U1RQF3 1178 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 LCHNA4D1U4 455 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 PPP1R3GB7ZBB8 358 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 ARHGEF15O94989 841 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 PIGRP01833 764 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 AMHP03971 560 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 BMP8BP34820 402 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 PBX2P40425 430 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 ACOT2P49753 483 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 CYP2J2P51589 502 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 STX17P56962 302 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 FAM189BP81408 668 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 NOLC1Q14978 699 aaKnown RBP eCLIP12.39□□□□□ -0.43
HTT-213ENST00000513806 KNOP1Q1ED39 458 aaKnown RBP12.39□□□□□ -0.43
HTT-213ENST00000513806 BMT2Q1RMZ1 405 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 KLHL40Q2TBA0 621 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 DPCR1Q3MIW9 517 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 CLLU1OSQ5K130 101 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 ZPBP2Q6X784 338 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 SPRED2Q7Z698 418 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 ZNF598Q86UK7 904 aaKnown RBP12.39□□□□□ -0.43
HTT-213ENST00000513806 TDHQ8IZJ6 230 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 SLC17A8Q8NDX2 589 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 POMGNT1Q8WZA1 660 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 KCNN1Q92952 543 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 TOP1MTQ969P6 601 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 EEF2KMTQ96G04 330 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 ZFP42Q96MM3 310 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 MSTO1Q9BUK6 570 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 KCTD10Q9H3F6 313 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 C1orf112Q9NSG2 853 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 MIOSQ9NXC5 875 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 CACNG4Q9UBN1 327 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 PARP2Q9UGN5 583 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 KCNG1Q9UIX4 513 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 LRFN2Q9ULH4 789 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 INPP5FQ9Y2H2 1132 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 PCDHB7Q9Y5E2 793 aa12.39□□□□□ -0.43
HTT-213ENST00000513806 UBE4BO95155 1302 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 CLDN3O15551 220 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 FAM189A1O60320 539 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 TOM1L1O75674 476 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 RECQL4O94761 1208 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 ITGA4P13612 1032 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 ATP2A2P16615 1042 aaKnown RBP12.38□□□□□ -0.43
HTT-213ENST00000513806 WNT7BP56706 349 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 NLRP12P59046 1061 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 SPAG1Q07617 926 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 MCL1Q07820 350 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 ALCAMQ13740 583 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 PCBP1Q15365 356 aaKnown RBP eCLIP12.38□□□□□ -0.43
HTT-213ENST00000513806 ARMCX5Q6P1M9 558 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 RBM43Q6ZSC3 357 aaKnown RBP12.38□□□□□ -0.43
HTT-213ENST00000513806 STXBP4Q6ZWJ1 553 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 HERC6Q8IVU3 1022 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 ADSSL1Q8N142 457 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 CRIPAKQ8N1N5 446 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 RDH13Q8NBN7 331 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 ADPGKQ9BRR6 497 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 GBP3Q9H0R5 595 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 TMEM206Q9H813 350 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 AGPAT3Q9NRZ7 376 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 AGO2Q9UKV8 859 aaKnown RBP12.38□□□□□ -0.43
HTT-213ENST00000513806 EXOC7Q9UPT5 735 aa12.38□□□□□ -0.43
HTT-213ENST00000513806 LAMA3Q16787 3333 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 A0A0B4J269 797 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 SYCE3A1L190 88 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 TBKBP1A7MCY6 615 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 B4GALT3O60512 393 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 POMCP01189 267 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 STAG3L1P0CL83 205 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 CXCL8P10145 99 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 MCF2P10911 925 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 MLH1P40692 756 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 DCAF4L1Q3SXM0 396 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 GLRA4Q5JXX5 417 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 PRPF38BQ5VTL8 546 aaKnown RBP12.37□□□□□ -0.43
HTT-213ENST00000513806 CRELD2Q6UXH1 353 aaPredicted RBP12.37□□□□□ -0.43
HTT-213ENST00000513806 C11orf57Q6ZUT1 292 aaPredicted RBP12.37□□□□□ -0.43
HTT-213ENST00000513806 MRPL10Q7Z7H8 261 aaKnown RBP12.37□□□□□ -0.43
HTT-213ENST00000513806 NPAS4Q8IUM7 802 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 GUF1Q8N442 669 aaKnown RBP12.37□□□□□ -0.43
HTT-213ENST00000513806 NELFBQ8WX92 580 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 CCDC51Q96ER9 411 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 CASD1Q96PB1 797 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms