RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 CTTNQ14247 550 aaKnown RBP10.75□□□□□ -0.69
TCOF1-212ENST00000513538 EPHA7Q15375 998 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 XKR9Q5GH70 373 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 PPP4R3AQ6IN85 833 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 FUT10Q6P4F1 479 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 LILRA6Q6PI73 481 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 GET4Q7L5D6 327 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-212ENST00000513538 ERMP1Q7Z2K6 904 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 NEK8Q86SG6 692 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 CDR2LQ86X02 465 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-212ENST00000513538 PALB2Q86YC2 1186 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 GLYCTKQ8IVS8 523 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 GPR152Q8TDT2 470 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 RMDN1Q96DB5 314 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 DYDC2Q96IM9 177 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 FAM20AQ96MK3 541 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 RPP25Q9BUL9 199 aaKnown RBP10.75□□□□□ -0.69
TCOF1-212ENST00000513538 PHF20Q9BVI0 1012 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 CSRNP2Q9H175 543 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 SLKQ9H2G2 1235 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-212ENST00000513538 PPME1Q9Y570 386 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 GPR179Q6PRD1 2367 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 POTEMA6NI47 508 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 LRRN2O75325 713 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 ERLIN2O94905 339 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 DCNP07585 359 aaKnown RBP10.74□□□□□ -0.69
TCOF1-212ENST00000513538 LAMP2P13473 410 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 ARF4P18085 180 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-212ENST00000513538 AKAP5P24588 427 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 PSMA5P28066 241 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 CAPSQ13938 189 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 SPECC1Q5M775 1068 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 RTP2Q5QGT7 225 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 NCAPH2Q6IBW4 605 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 GALNT17Q6IS24 598 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 NOTUMQ6P988 496 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 PRSS55Q6UWB4 352 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-212ENST00000513538 PIK3AP1Q6ZUJ8 805 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 IFNLR1Q8IU57 520 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-212ENST00000513538 CNNM3Q8NE01 707 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 TCP11Q8WWU5 503 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 STAMQ92783 540 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 ZNF274Q96GC6 653 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-212ENST00000513538 MTRQ99707 1265 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 PAAF1Q9BRP4 392 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 FOXQ1Q9C009 403 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 NT5C3AQ9H0P0 336 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 CXCL16Q9H2A7 254 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 ARHGEF3Q9NR81 526 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 KLK14Q9P0G3 267 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 NUMBLQ9Y6R0 609 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 ZNF292O60281 2723 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 TRIP11Q15643 1979 aa10.74□□□□□ -0.69
TCOF1-212ENST00000513538 DMXL1Q9Y485 3027 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 CEP250Q9BV73 2442 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 A0A087WWV3 80 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 CCDC194A0A1B0GVG4 234 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 MED19A0JLT2 244 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-212ENST00000513538 INO80B-WBP1J3KQ70 363 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 STK25O00506 426 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 WNT7AO00755 349 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 CPLX1O14810 134 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 GAS2O43903 313 aaKnown RBP10.73□□□□□ -0.69
TCOF1-212ENST00000513538 CCNT1O60563 726 aaKnown RBP10.73□□□□□ -0.69
TCOF1-212ENST00000513538 DKC1O60832 514 aaKnown RBP eCLIP10.73□□□□□ -0.69
TCOF1-212ENST00000513538 SLITRK3O94933 977 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 LMNAP02545 664 aaKnown RBP10.73□□□□□ -0.69
TCOF1-212ENST00000513538 GLRA2P23416 452 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 ARL2P36404 184 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 NTHL1P78549 312 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 SCRN1Q12765 414 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 CYP26C1Q6V0L0 522 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 MAML2Q8IZL2 1156 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-212ENST00000513538 FAM177A1Q8N128 213 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-212ENST00000513538 HDAC7Q8WUI4 952 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 FGF14Q92915 247 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 CCDC51Q96ER9 411 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 PRKD2Q9BZL6 878 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 ZSWIM4Q9H7M6 989 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 UBN1Q9NPG3 1134 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 SLC2A4RGQ9NR83 387 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 ZDHHC7Q9NXF8 308 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 FNIP2Q9P278 1114 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 SSX2IPQ9Y2D8 614 aa10.73□□□□□ -0.69
TCOF1-212ENST00000513538 TTLL13PA6NNM8 815 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 TBX3O15119 743 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 ASAP2O43150 1006 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 ADAM12O43184 909 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 ABCB7O75027 752 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 ZMYND10O75800 440 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 CTDNEP1O95476 244 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 NPTXRO95502 500 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 SP9P0CG40 484 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 GCFC2P16383 781 aaKnown RBP10.72□□□□□ -0.69
TCOF1-212ENST00000513538 AXLP30530 894 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 GRIK3Q13003 919 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 NR5A1Q13285 461 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 PHLDB3Q6NSJ2 640 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 PARM1Q6UWI2 310 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 OTUD6AQ7L8S5 288 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms