RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 POLIQ9UNA4 740 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 ADAMTS9Q9P2N4 1935 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 TTC41PQ6P2S7 1318 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 CDX4O14627 284 aaPredicted RBP10.83□□□□□ -0.68
PTPN20-228ENST00000513266 CCNE1P24864 410 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 PXNP49023 591 aaPredicted RBP10.83□□□□□ -0.68
PTPN20-228ENST00000513266 FAM160B1Q5W0V3 765 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 EFCAB12Q6NXP0 572 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 PDXDC2PQ6P474 469 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 MAP4K3Q8IVH8 894 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 URGCPQ8TCY9 931 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 PIBF1Q8WXW3 757 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 ELSPBP1Q96BH3 223 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 MCRS1Q96EZ8 462 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 FAM227BQ96M60 508 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 FAM193BQ96PV7 902 aaPredicted RBP10.83□□□□□ -0.68
PTPN20-228ENST00000513266 ZNF334Q9HCZ1 680 aaPredicted RBP10.83□□□□□ -0.68
PTPN20-228ENST00000513266 ZNF302Q9NR11 478 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.83□□□□□ -0.68
PTPN20-228ENST00000513266 HELLSQ9NRZ9 838 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 KCNH3Q9ULD8 1083 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 RAI2Q9Y5P3 530 aa10.83□□□□□ -0.68
PTPN20-228ENST00000513266 GON4LQ3T8J9 2241 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 POMCP01189 267 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 C8AP07357 584 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 SKIP12755 728 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 HOXA9P31269 272 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 GRM4Q14833 912 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 SEC23AQ15436 765 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 SLC5A9Q2M3M2 681 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 PLK5Q496M5 336 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 PABPC1LQ4VXU2 614 aaKnown RBP10.82□□□□□ -0.68
PTPN20-228ENST00000513266 PPM1LQ5SGD2 360 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 IFIT1BQ5T764 474 aaKnown RBP10.82□□□□□ -0.68
PTPN20-228ENST00000513266 TRMT1LQ7Z2T5 733 aaKnown RBP10.82□□□□□ -0.68
PTPN20-228ENST00000513266 COLGALT2Q8IYK4 626 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 ZNF710Q8N1W2 664 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 OTUD7AQ8TE49 926 aaPredicted RBP10.82□□□□□ -0.68
PTPN20-228ENST00000513266 GPR62Q9BZJ7 368 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 TMEM9BQ9NQ34 198 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 SCUBE2Q9NQ36 999 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 TRPV5Q9NQA5 729 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 GDE1Q9NZC3 331 aa10.82□□□□□ -0.68
PTPN20-228ENST00000513266 DNMT3BQ9UBC3 853 aaKnown RBP10.82□□□□□ -0.68
PTPN20-228ENST00000513266 SPAARA0A1B0GVQ0 90 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 DDX39AO00148 427 aaKnown RBP10.81□□□□□ -0.68
PTPN20-228ENST00000513266 MAGEB2O15479 319 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 CAVIN2O95810 425 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 CCDC192P0DO97 292 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 NT5C2P49902 561 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 RAB27AP51159 221 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 LRRC32Q14392 662 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 SWSAP1Q6NVH7 229 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 PRSS55Q6UWB4 352 aaPredicted RBP10.81□□□□□ -0.68
PTPN20-228ENST00000513266 CKAP2LQ8IYA6 745 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 GPR65Q8IYL9 337 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 CHCHD4Q8N4Q1 142 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 IRF7Q92985 503 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 CRELD1Q96HD1 420 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 SCLT1Q96NL6 688 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 MXRA8Q9BRK3 442 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 TRMT61BQ9BVS5 477 aaKnown RBP10.81□□□□□ -0.68
PTPN20-228ENST00000513266 DUSP15Q9H1R2 295 aaPredicted RBP10.81□□□□□ -0.68
PTPN20-228ENST00000513266 AGO4Q9HCK5 861 aaKnown RBP10.81□□□□□ -0.68
PTPN20-228ENST00000513266 KANSL3Q9P2N6 904 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 PIN4Q9Y237 131 aaKnown RBP10.81□□□□□ -0.68
PTPN20-228ENST00000513266 RAXQ9Y2V3 346 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 MRPS23Q9Y3D9 190 aaKnown RBP10.81□□□□□ -0.68
PTPN20-228ENST00000513266 PCDHB2Q9Y5E7 798 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 TNRC6BQ9UPQ9 1833 aaKnown RBP10.81□□□□□ -0.68
PTPN20-228ENST00000513266 TEP1Q99973 2627 aaKnown RBP10.81□□□□□ -0.68
PTPN20-228ENST00000513266 COL6A6A6NMZ7 2263 aa10.81□□□□□ -0.68
PTPN20-228ENST00000513266 CCDC163A0A0D9SF12 145 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 BCLAF3A2AJT9 711 aaKnown RBP10.8□□□□□ -0.68
PTPN20-228ENST00000513266 EXTL3O43909 919 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 XYLBO75191 536 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 AKAP3O75969 853 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 POU2F2P09086 479 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 CEBPBP17676 345 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 TMOD1P28289 359 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 GDI1P31150 447 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 OR1G1P47890 313 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 SIM1P81133 766 aaPredicted RBP10.8□□□□□ -0.68
PTPN20-228ENST00000513266 CREB5Q02930 508 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 DSC1Q08554 894 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 UBE2SQ16763 222 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 UAP1L1Q3KQV9 507 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 MCMDC2Q4G0Z9 681 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 LIN9Q5TKA1 542 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 ZNF605Q86T29 641 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 NLRP7Q8WX94 980 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 SLC39A7Q92504 469 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 PGBD4Q96DM1 585 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 RSAD1Q9HA92 442 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 LY9Q9HBG7 655 aa10.8□□□□□ -0.68
PTPN20-228ENST00000513266 MAFBQ9Y5Q3 323 aaPredicted RBP10.8□□□□□ -0.68
PTPN20-228ENST00000513266 MYO16Q9Y6X6 1858 aa10.79□□□□□ -0.68
PTPN20-228ENST00000513266 TK2O00142 265 aa10.79□□□□□ -0.68
PTPN20-228ENST00000513266 ARNTLO00327 626 aa10.79□□□□□ -0.68
PTPN20-228ENST00000513266 ZNF213O14771 459 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms