RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 NPTXRO95502 500 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 RPN1P04843 607 aaKnown RBP18.05■□□□□ 0.48
HMGCL-209ENST00000513148 MYL1P05976 194 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 KMT5BQ4FZB7 885 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 FAM26FQ5R3K3 315 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 UBXN11Q5T124 520 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 EEF1DP3Q658K8 133 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 SLC27A1Q6PCB7 646 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 ECHDC2Q86YB7 292 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 SLC17A8Q8NDX2 589 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 PHOSPHO2Q8TCD6 241 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 KCNF1Q9H3M0 494 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 SLC39A2Q9NP94 309 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 ANKFY1Q9P2R3 1169 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 PCDHB2Q9Y5E7 798 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 A0A0U1RQF3 1178 aa18.04■□□□□ 0.48
HMGCL-209ENST00000513148 TLL1O43897 1013 aa18.04■□□□□ 0.48
HMGCL-209ENST00000513148 GJB5O95377 273 aa18.04■□□□□ 0.48
HMGCL-209ENST00000513148 MYOGP15173 224 aa18.04■□□□□ 0.48
HMGCL-209ENST00000513148 PBX2P40425 430 aa18.04■□□□□ 0.48
HMGCL-209ENST00000513148 GTF2BQ00403 316 aa18.04■□□□□ 0.48
HMGCL-209ENST00000513148 KCNA1Q09470 495 aa18.04■□□□□ 0.48
HMGCL-209ENST00000513148 NPAS4Q8IUM7 802 aa18.04■□□□□ 0.48
HMGCL-209ENST00000513148 LPPQ93052 612 aa18.04■□□□□ 0.48
HMGCL-209ENST00000513148 ACO2Q99798 780 aaKnown RBP18.04■□□□□ 0.48
HMGCL-209ENST00000513148 IKZF4Q9H2S9 585 aa18.04■□□□□ 0.48
HMGCL-209ENST00000513148 HES2Q9Y543 173 aa18.04■□□□□ 0.48
HMGCL-209ENST00000513148 HNRNPDLO14979 420 aaKnown RBP18.03■□□□□ 0.48
HMGCL-209ENST00000513148 N4BP3O15049 544 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 PRPF6O94906 941 aaKnown RBP18.03■□□□□ 0.48
HMGCL-209ENST00000513148 STAG3L1P0CL83 205 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 FGFR1P11362 822 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 HARSP12081 509 aaKnown RBP18.03■□□□□ 0.48
HMGCL-209ENST00000513148 GATMP50440 423 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 ZBTB33Q86T24 672 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 KIF18AQ8NI77 898 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 CCDC51Q96ER9 411 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 YME1L1Q96TA2 773 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 ADPGKQ9BRR6 497 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 TCHPQ9BT92 498 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 APOL6Q9BWW8 343 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 NXF3Q9H4D5 531 aaKnown RBP18.03■□□□□ 0.48
HMGCL-209ENST00000513148 MEIS3P2A8K0S8 358 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 PPP1R37O75864 691 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 ATF7P17544 494 aaPredicted RBP18.03■□□□□ 0.48
HMGCL-209ENST00000513148 MATR3P43243 847 aaKnown RBP eCLIP18.03■□□□□ 0.482e-8■■■□□ 16.9
HMGCL-209ENST00000513148 LIG4P49917 911 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 RAB27AP51159 221 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 EHHADHQ08426 723 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 CAMK4Q16566 473 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 ZNF568Q3ZCX4 644 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 MAP4K3Q8IVH8 894 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 ZBTB45Q96K62 511 aaPredicted RBP18.03■□□□□ 0.48
HMGCL-209ENST00000513148 PBX4Q9BYU1 374 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 ST6GALNAC4Q9H4F1 302 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 TMEM161AQ9NX61 479 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 HOOK1Q9UJC3 728 aaKnown RBP18.03■□□□□ 0.48
HMGCL-209ENST00000513148 PYCARDQ9ULZ3 195 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 IPPQ9Y573 584 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 PCDHB13Q9Y5F0 798 aa18.03■□□□□ 0.48
HMGCL-209ENST00000513148 FAM189BP81408 668 aa18.02■□□□□ 0.48
HMGCL-209ENST00000513148 LRIT3Q3SXY7 679 aa18.02■□□□□ 0.48
HMGCL-209ENST00000513148 PAN2Q504Q3 1202 aaKnown RBP18.02■□□□□ 0.48
HMGCL-209ENST00000513148 CRIPAKQ8N1N5 446 aa18.02■□□□□ 0.48
HMGCL-209ENST00000513148 C17orf53Q8N3J3 647 aaPredicted RBP18.02■□□□□ 0.48
HMGCL-209ENST00000513148 TRAIPQ9BWF2 469 aa18.02■□□□□ 0.48
HMGCL-209ENST00000513148 TNFSF13BQ9Y275 285 aa18.02■□□□□ 0.48
HMGCL-209ENST00000513148 TISP43B9A030 160 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 SOX1O00570 391 aaPredicted RBP18.01■□□□□ 0.47
HMGCL-209ENST00000513148 FAM43BQ6ZT52 329 aaPredicted RBP18.01■□□□□ 0.47
HMGCL-209ENST00000513148 SMG8Q8ND04 991 aaKnown RBP18.01■□□□□ 0.47
HMGCL-209ENST00000513148 CCDC47Q96A33 483 aaKnown RBP18.01■□□□□ 0.47
HMGCL-209ENST00000513148 STRA6Q9BX79 667 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 LCHNA4D1U4 455 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 SKIP12755 728 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 SCP2P22307 547 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 ABCD1P33897 745 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 STK4Q13043 487 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 HABP4Q5JVS0 413 aaKnown RBP18.01■□□□□ 0.47
HMGCL-209ENST00000513148 STXBP4Q6ZWJ1 553 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.01■□□□□ 0.47
HMGCL-209ENST00000513148 ZNF598Q86UK7 904 aaKnown RBP18.01■□□□□ 0.47
HMGCL-209ENST00000513148 NELFCDQ8IXH7 590 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 SYCP3Q8IZU3 236 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 HVCN1Q96D96 273 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 ACCSQ96QU6 501 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 CDT1Q9H211 546 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 ELAC1Q9H777 363 aaKnown RBP18.01■□□□□ 0.47
HMGCL-209ENST00000513148 YBX2Q9Y2T7 364 aaKnown RBP18.01■□□□□ 0.47
HMGCL-209ENST00000513148 COL4A6Q14031 1691 aa18.01■□□□□ 0.47
HMGCL-209ENST00000513148 FNDC1Q4ZHG4 1894 aaPredicted RBP18■□□□□ 0.47
HMGCL-209ENST00000513148 TOM1L1O75674 476 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 DGKIO75912 1065 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 AKAP5P24588 427 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 DNAJB2P25686 324 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 OSTNP61366 133 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 ALCAMQ13740 583 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 MPZL3Q6UWV2 235 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 ZPBP2Q6X784 338 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 KIAA0895Q8NCT3 520 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms