RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 NGRNQ9NPE2 291 aaKnown RBP7.17□□□□□ -1.26
KDM3B-208ENST00000512928 KMT5AQ9NQR1 393 aa7.17□□□□□ -1.26
KDM3B-208ENST00000512928 KANSL3Q9P2N6 904 aa7.17□□□□□ -1.26
KDM3B-208ENST00000512928 FAN1Q9Y2M0 1017 aa7.17□□□□□ -1.26
KDM3B-208ENST00000512928 GDAQ9Y2T3 454 aa7.17□□□□□ -1.26
KDM3B-208ENST00000512928 MYO7AQ13402 2215 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 NPHP3-ACAD11A0A0J9YXS1 232 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 A0A1B0GUA9 196 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 FSD2A1L4K1 749 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 CARNS1A5YM72 827 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 C2orf71A6NGG8 1288 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 TTLL13PA6NNM8 815 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 ACKR2O00590 384 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 NRP1O14786 923 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 FSCN2O14926 492 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 SLC16A4O15374 487 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 MBTPS2O43462 519 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 B4GALT3O60512 393 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 GLP2RO95838 553 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 URODP06132 367 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 PLA2G4BP0C869 781 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 MARCKSP29966 332 aaPredicted RBP7.16□□□□□ -1.26
KDM3B-208ENST00000512928 NPTX2P47972 431 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 SMTNP53814 917 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 OSTNP61366 133 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 STRN3Q13033 797 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 SMAD4Q13485 552 aaKnown RBP7.16□□□□□ -1.26
KDM3B-208ENST00000512928 COL19A1Q14993 1142 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 DUSP6Q16828 381 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 CTC1Q2NKJ3 1217 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 ZNF568Q3ZCX4 644 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 TMEM31Q5JXX7 168 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 ATF7IP2Q5U623 682 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 KIAA1841Q6NSI8 718 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 RINT1Q6NUQ1 792 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 FAM173BQ6P4H8 233 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 APBB1IPQ7Z5R6 666 aaPredicted RBP7.16□□□□□ -1.26
KDM3B-208ENST00000512928 ZBTB33Q86T24 672 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 DDX53Q86TM3 631 aaKnown RBP7.16□□□□□ -1.26
KDM3B-208ENST00000512928 GPBP1Q86WP2 473 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 GJD3Q8N144 294 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 MRPL43Q8N983 215 aaKnown RBP7.16□□□□□ -1.26
KDM3B-208ENST00000512928 RABGGTAQ92696 567 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 AK8Q96MA6 479 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 PNMA5Q96PV4 448 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 PHOX2BQ99453 314 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 CDCA3Q99618 268 aaPredicted RBP7.16□□□□□ -1.26
KDM3B-208ENST00000512928 TMEM175Q9BSA9 504 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 TCHPQ9BT92 498 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 MMTAG2Q9BU76 263 aaKnown RBP7.16□□□□□ -1.26
KDM3B-208ENST00000512928 CCDC113Q9H0I3 377 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 FZD8Q9H461 694 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 TSHZ2Q9NRE2 1034 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 SNTG2Q9NY99 539 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 CLEC1BQ9P126 229 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 ANKFY1Q9P2R3 1169 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 GIT1Q9Y2X7 761 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 CLIC4Q9Y696 253 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 TCHHQ07283 1943 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 PHLPP2Q6ZVD8 1323 aa7.16□□□□□ -1.26
KDM3B-208ENST00000512928 CASTOR2A6NHX0 329 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 F8W810 466 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 TULP1O00294 542 aaPredicted RBP7.15□□□□□ -1.26
KDM3B-208ENST00000512928 STX6O43752 255 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 TBCAO75347 108 aaKnown RBP7.15□□□□□ -1.26
KDM3B-208ENST00000512928 RECQL4O94761 1208 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 FAM13AO94988 1023 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 EDN1P05305 212 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 MYBP10242 640 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 PLCG1P19174 1290 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 SP100P23497 879 aaPredicted RBP7.15□□□□□ -1.26
KDM3B-208ENST00000512928 KLRC2P26717 231 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 LONP1P36776 959 aaKnown RBP7.15□□□□□ -1.26
KDM3B-208ENST00000512928 TXLNAP40222 546 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 YARSP54577 528 aaKnown RBP7.15□□□□□ -1.26
KDM3B-208ENST00000512928 GRIN1Q05586 938 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 GRIK3Q13003 919 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 RESTQ13127 1097 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 KARSQ15046 597 aaKnown RBP7.15□□□□□ -1.26
KDM3B-208ENST00000512928 FAM187BQ17R55 369 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 DCAF4L1Q3SXM0 396 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 FOXD4L6Q3SYB3 417 aaPredicted RBP7.15□□□□□ -1.26
KDM3B-208ENST00000512928 GLRA4Q5JXX5 417 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 SPECC1Q5M775 1068 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 EEF1DP3Q658K8 133 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 FOXD4L3Q6VB84 417 aaPredicted RBP7.15□□□□□ -1.26
KDM3B-208ENST00000512928 C1orf186Q6ZWK4 172 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 FAM178BQ8IXR5 827 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 COLGALT2Q8IYK4 626 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 DAW1Q8N136 415 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 SYT2Q8N9I0 419 aaPredicted RBP7.15□□□□□ -1.26
KDM3B-208ENST00000512928 VN1R2Q8NFZ6 395 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 HASPINQ8TF76 798 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 BICD1Q96G01 975 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 POP1Q99575 1024 aaKnown RBP7.15□□□□□ -1.26
KDM3B-208ENST00000512928 COLEC11Q9BWP8 271 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 EMILIN2Q9BXX0 1053 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 MRPL4Q9BYD3 311 aaKnown RBP7.15□□□□□ -1.26
KDM3B-208ENST00000512928 ZBP1Q9H171 429 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 MRPL17Q9NRX2 175 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms