RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 DMP1Q13316 513 aaPredicted RBP18.17■□□□□ 0.5
DDX41-213ENST00000512027 DUSP6Q16828 381 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 ARSHQ5FYA8 562 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 LLGL2Q6P1M3 1020 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 VPS52Q8N1B4 723 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 GSTCDQ8NEC7 633 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 RASSF8Q8NHQ8 419 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 RABGGTAQ92696 567 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 CALML4Q96GE6 196 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 EPSTI1Q96J88 318 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 DRC1Q96MC2 740 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 ZBP1Q9H171 429 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 UBN1Q9NPG3 1134 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 KMT5AQ9NQR1 393 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 BLOC1S4Q9NUP1 217 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 GIT1Q9Y2X7 761 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 PHLPP2Q6ZVD8 1323 aa18.17■□□□□ 0.5
DDX41-213ENST00000512027 GRXCR2A6NFK2 248 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 K7ERI5 159 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 NRP1O14786 923 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 INPPL1O15357 1258 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 NCK2O43639 380 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 OR1G1P47890 313 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 EFNA5P52803 228 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 MCM6Q14566 821 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 ATF7IP2Q5U623 682 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 GPBP1Q86WP2 473 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 COLGALT2Q8IYK4 626 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 RSPH1Q8WYR4 309 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 CD320Q9NPF0 282 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 MARCH5Q9NX47 278 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 KANSL3Q9P2N6 904 aa18.16■□□□□ 0.5
DDX41-213ENST00000512027 C2orf71A6NGG8 1288 aa18.15■□□□□ 0.5
DDX41-213ENST00000512027 RECQL4O94761 1208 aa18.15■□□□□ 0.5
DDX41-213ENST00000512027 DSC1Q08554 894 aa18.15■□□□□ 0.5
DDX41-213ENST00000512027 SMC1AQ14683 1233 aaKnown RBP18.15■□□□□ 0.5
DDX41-213ENST00000512027 FOXD4L6Q3SYB3 417 aaPredicted RBP18.15■□□□□ 0.5
DDX41-213ENST00000512027 PDE12Q6L8Q7 609 aaKnown RBP18.15■□□□□ 0.5
DDX41-213ENST00000512027 FOXD4L3Q6VB84 417 aaPredicted RBP18.15■□□□□ 0.5
DDX41-213ENST00000512027 HACE1Q8IYU2 909 aa18.15■□□□□ 0.5
DDX41-213ENST00000512027 CEP120Q8N960 986 aa18.15■□□□□ 0.5
DDX41-213ENST00000512027 MSLNLQ96KJ4 702 aa18.15■□□□□ 0.5
DDX41-213ENST00000512027 REEP2Q9BRK0 252 aa18.15■□□□□ 0.5
DDX41-213ENST00000512027 ADPGKQ9BRR6 497 aa18.15■□□□□ 0.5
DDX41-213ENST00000512027 TMEM175Q9BSA9 504 aa18.15■□□□□ 0.5
DDX41-213ENST00000512027 NGRNQ9NPE2 291 aaKnown RBP18.15■□□□□ 0.5
DDX41-213ENST00000512027 ARHGAP28Q9P2N2 729 aa18.15■□□□□ 0.5
DDX41-213ENST00000512027 CD207Q9UJ71 328 aa18.15■□□□□ 0.5
DDX41-213ENST00000512027 FAN1Q9Y2M0 1017 aa18.15■□□□□ 0.5
DDX41-213ENST00000512027 GDAQ9Y2T3 454 aa18.15■□□□□ 0.5
DDX41-213ENST00000512027 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.14■□□□□ 0.49
DDX41-213ENST00000512027 MBTPS2O43462 519 aa18.14■□□□□ 0.49
DDX41-213ENST00000512027 CXCL14O95715 111 aa18.14■□□□□ 0.49
DDX41-213ENST00000512027 HSP90AA1P07900 732 aaKnown RBP18.14■□□□□ 0.49
DDX41-213ENST00000512027 DDX53Q86TM3 631 aaKnown RBP18.14■□□□□ 0.49
DDX41-213ENST00000512027 MRPL43Q8N983 215 aaKnown RBP18.14■□□□□ 0.49
DDX41-213ENST00000512027 RAD54LQ92698 747 aa18.14■□□□□ 0.49
DDX41-213ENST00000512027 RPS6KC1Q96S38 1066 aa18.14■□□□□ 0.49
DDX41-213ENST00000512027 ACO2Q99798 780 aaKnown RBP18.14■□□□□ 0.49
DDX41-213ENST00000512027 TARS2Q9BW92 718 aaKnown RBP18.14■□□□□ 0.49
DDX41-213ENST00000512027 APOL5Q9BWW9 433 aa18.14■□□□□ 0.49
DDX41-213ENST00000512027 SRPRBQ9Y5M8 271 aaKnown RBP18.14■□□□□ 0.49
DDX41-213ENST00000512027 PTGESO14684 152 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 ALDH2P05091 517 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 PLS3P13797 630 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 PKP1Q13835 747 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 DCAF4L1Q3SXM0 396 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 TAS1R1Q7RTX1 841 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 ZBTB33Q86T24 672 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 FAM178BQ8IXR5 827 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 KCTD17Q8N5Z5 321 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 KHSRPQ92945 711 aaKnown RBP eCLIP18.13■□□□□ 0.49
DDX41-213ENST00000512027 PAAF1Q9BRP4 392 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 TIPINQ9BVW5 301 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 CCSER1Q9C0I3 900 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 CDT1Q9H211 546 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 ZSCAN16Q9H4T2 348 aaPredicted RBP18.13■□□□□ 0.49
DDX41-213ENST00000512027 TMEM134Q9H6X4 195 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 TFIP11Q9UBB9 837 aaKnown RBP18.13■□□□□ 0.49
DDX41-213ENST00000512027 TNFSF13BQ9Y275 285 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 PLXNA3P51805 1871 aa18.13■□□□□ 0.49
DDX41-213ENST00000512027 CITO14578 2027 aa18.12■□□□□ 0.49
DDX41-213ENST00000512027 SLC26A4O43511 780 aa18.12■□□□□ 0.49
DDX41-213ENST00000512027 CLASP2O75122 1294 aaKnown RBP18.12■□□□□ 0.49
DDX41-213ENST00000512027 CTSAP10619 480 aa18.12■□□□□ 0.49
DDX41-213ENST00000512027 HARSP12081 509 aaKnown RBP18.12■□□□□ 0.49
DDX41-213ENST00000512027 OSTNP61366 133 aa18.12■□□□□ 0.49
DDX41-213ENST00000512027 GRIK3Q13003 919 aa18.12■□□□□ 0.49
DDX41-213ENST00000512027 KCNC3Q14003 757 aa18.12■□□□□ 0.49
DDX41-213ENST00000512027 SLC39A14Q15043 492 aa18.12■□□□□ 0.49
DDX41-213ENST00000512027 PTPN14Q15678 1187 aa18.12■□□□□ 0.49
DDX41-213ENST00000512027 ZNF568Q3ZCX4 644 aa18.12■□□□□ 0.49
DDX41-213ENST00000512027 GLRA4Q5JXX5 417 aa18.12■□□□□ 0.49
DDX41-213ENST00000512027 TMEM161BQ8NDZ6 487 aa18.12■□□□□ 0.49
DDX41-213ENST00000512027 LARP4BQ92615 738 aaKnown RBP18.12■□□□□ 0.49
DDX41-213ENST00000512027 ZBTB45Q96K62 511 aaPredicted RBP18.12■□□□□ 0.49
DDX41-213ENST00000512027 B3GALT6Q96L58 329 aa18.12■□□□□ 0.49
DDX41-213ENST00000512027 CDCA3Q99618 268 aaPredicted RBP18.12■□□□□ 0.49
DDX41-213ENST00000512027 MRPL4Q9BYD3 311 aaKnown RBP18.12■□□□□ 0.49
DDX41-213ENST00000512027 C17orf75Q9HAS0 396 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms