RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 IQUBQ8NA54 791 aa13.71□□□□□ -0.21
PTCD2-209ENST00000511752 MRPS27Q92552 414 aaKnown RBP13.71□□□□□ -0.21
PTCD2-209ENST00000511752 PPP2R3CQ969Q6 453 aa13.71□□□□□ -0.21
PTCD2-209ENST00000511752 RPS6KC1Q96S38 1066 aa13.71□□□□□ -0.21
PTCD2-209ENST00000511752 GAD1Q99259 594 aa13.71□□□□□ -0.21
PTCD2-209ENST00000511752 ACO2Q99798 780 aaKnown RBP13.71□□□□□ -0.21
PTCD2-209ENST00000511752 TCHPQ9BT92 498 aa13.71□□□□□ -0.21
PTCD2-209ENST00000511752 TARS2Q9BW92 718 aaKnown RBP13.71□□□□□ -0.21
PTCD2-209ENST00000511752 NSUN3Q9H649 340 aaKnown RBP13.71□□□□□ -0.21
PTCD2-209ENST00000511752 NRDE2Q9H7Z3 1164 aa13.71□□□□□ -0.21
PTCD2-209ENST00000511752 CHD7Q9P2D1 2997 aa13.71□□□□□ -0.21
PTCD2-209ENST00000511752 PUF60Q9UHX1 559 aaKnown RBP13.71□□□□□ -0.21
PTCD2-209ENST00000511752 LZTS1Q9Y250 596 aa13.71□□□□□ -0.21
PTCD2-209ENST00000511752 TCHHQ07283 1943 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 CSPG5O95196 566 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 POMCP01189 267 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 AKAP5P24588 427 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 PBX3P40426 434 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 AMPD3Q01432 767 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 ZNF568Q3ZCX4 644 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 PDE12Q6L8Q7 609 aaKnown RBP13.7□□□□□ -0.22
PTCD2-209ENST00000511752 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
PTCD2-209ENST00000511752 FAM178BQ8IXR5 827 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 SLC39A11Q8N1S5 342 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 LEO1Q8WVC0 666 aaPredicted RBP13.7□□□□□ -0.22
PTCD2-209ENST00000511752 DHX58Q96C10 678 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 BICD1Q96G01 975 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 TMEM169Q96HH4 297 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 PYM1Q9BRP8 204 aaKnown RBP13.7□□□□□ -0.22
PTCD2-209ENST00000511752 TMEM175Q9BSA9 504 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 SCAND2PQ9GZW5 306 aaPredicted RBP13.7□□□□□ -0.22
PTCD2-209ENST00000511752 TLR9Q9NR96 1032 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 THEGQ9P2T0 379 aa13.7□□□□□ -0.22
PTCD2-209ENST00000511752 MYMKA6NI61 221 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 NT5C1B-RDH14C9J2C7 533 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 TOM1L1O75674 476 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 DDHD2O94830 711 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 ALDH2P05091 517 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 IDEP14735 1019 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 GAP43P17677 238 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 DNAJB1P25685 340 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 SCNN1GP51170 649 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 AFF1P51825 1210 aaKnown RBP13.69□□□□□ -0.22
PTCD2-209ENST00000511752 GRIK3Q13003 919 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 CAMK1Q14012 370 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 BMS1Q14692 1282 aaKnown RBP13.69□□□□□ -0.22
PTCD2-209ENST00000511752 E2F4Q16254 413 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 RESP18Q5W5W9 173 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 ZPBP2Q6X784 338 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 ZNF280BQ86YH2 543 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 MICAL1Q8TDZ2 1067 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 KCNN1Q92952 543 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 ZFP42Q96MM3 310 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 CCDC94Q9BW85 323 aaPredicted RBP13.69□□□□□ -0.22
PTCD2-209ENST00000511752 CDT1Q9H211 546 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 TNMDQ9H2S6 317 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 MAGEF1Q9HAY2 307 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 SNTG2Q9NY99 539 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 KLK14Q9P0G3 267 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 SEL1LQ9UBV2 794 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 DNAJB4Q9UDY4 337 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 TBX20Q9UMR3 447 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 COG5Q9UP83 839 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 GDAQ9Y2T3 454 aa13.69□□□□□ -0.22
PTCD2-209ENST00000511752 POLR2DO15514 142 aaKnown RBP13.68□□□□□ -0.22
PTCD2-209ENST00000511752 NCK2O43639 380 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 NR1I2O75469 434 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 RECQL4O94761 1208 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 GALTP07902 379 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 MCF2P10911 925 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 GRM5P41594 1212 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 MATR3P43243 847 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTCD2-209ENST00000511752 SLC11A1P49279 550 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 LIG4P49917 911 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 YARSP54577 528 aaKnown RBP13.68□□□□□ -0.22
PTCD2-209ENST00000511752 TCEAL5Q5H9L2 206 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 ADALQ6DHV7 355 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 MPZL3Q6UWV2 235 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 ZBTB33Q86T24 672 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 SFR1Q86XK3 245 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 CCDC65Q8IXS2 484 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 COLGALT2Q8IYK4 626 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 HLA-CQ95604 372 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 DNAJC19Q96DA6 116 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 PTPRHQ9HD43 1115 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 PRDM6Q9NQX0 595 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 TOPORSQ9NS56 1045 aaPredicted RBP13.68□□□□□ -0.22
PTCD2-209ENST00000511752 KBTBD4Q9NVX7 518 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 MIOSQ9NXC5 875 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 FAN1Q9Y2M0 1017 aa13.68□□□□□ -0.22
PTCD2-209ENST00000511752 HNRNPDLO14979 420 aaKnown RBP13.67□□□□□ -0.22
PTCD2-209ENST00000511752 CLDN3O15551 220 aa13.67□□□□□ -0.22
PTCD2-209ENST00000511752 THP07101 528 aa13.67□□□□□ -0.22
PTCD2-209ENST00000511752 HARSP12081 509 aaKnown RBP13.67□□□□□ -0.22
PTCD2-209ENST00000511752 PROZP22891 400 aa13.67□□□□□ -0.22
PTCD2-209ENST00000511752 NMT1P30419 496 aaKnown RBP13.67□□□□□ -0.22
PTCD2-209ENST00000511752 IRS1P35568 1242 aa13.67□□□□□ -0.22
PTCD2-209ENST00000511752 GTF2BQ00403 316 aa13.67□□□□□ -0.22
PTCD2-209ENST00000511752 DSC1Q08554 894 aa13.67□□□□□ -0.22
PTCD2-209ENST00000511752 NOLC1Q14978 699 aaKnown RBP eCLIP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms