RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 PLS1Q14651 629 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 UBE3CQ15386 1083 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 ABHD15Q6UXT9 468 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 ZSWIM9Q86XI8 627 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 COL23A1Q86Y22 540 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 RHOT1Q8IXI2 618 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 NKAPQ8N5F7 415 aaKnown RBP6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 OR7D4Q8NG98 312 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 IL31RAQ8NI17 732 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 IFI44Q8TCB0 444 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 ZNF480Q8WV37 535 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 GFM2Q969S9 779 aaKnown RBP6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 CLPTM1LQ96KA5 538 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 MSLNLQ96KJ4 702 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 RIPOR3Q96MK2 946 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 COLEC11Q9BWP8 271 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 APOL5Q9BWW9 433 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 WDR12Q9GZL7 423 aaKnown RBP6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 CNTD2Q9H8S5 307 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 ZMAT3Q9HA38 289 aaKnown RBP6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 PPCSQ9HAB8 311 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 STARD7Q9NQZ5 370 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 TDP1Q9NUW8 608 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 DNAI1Q9UI46 699 aa6.72□□□□□ -1.33
HMGB1P47-201ENST00000511281 RHPN2P1A8MT19 583 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 GASTP01350 101 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 PAX3P23760 479 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 POLD1P28340 1107 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 CRHR1P34998 444 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 SREBF1P36956 1147 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 SRSF3P84103 164 aaKnown RBP6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 ZNF827Q17R98 1081 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 PRR31Q5SQ13 230 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 HEATR3Q7Z4Q2 680 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 APBB1IPQ7Z5R6 666 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 CLEC14AQ86T13 490 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 VPS37AQ8NEZ2 397 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 SLC35A4Q96G79 324 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 UNKQ9C0B0 810 aaKnown RBP6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 WDCPQ9H6R7 721 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 PNPOQ9NVS9 261 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 TRPS1Q9UHF7 1281 aa6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 MBD1Q9UIS9 605 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P47-201ENST00000511281 LRRC14BA6NHZ5 514 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 DDX3XO00571 662 aaKnown RBP eCLIP6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 MTSS1O43312 755 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 GUCY1A2P33402 732 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 CDR1P51861 262 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 ZNF543Q08ER8 600 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 KCNMB1Q16558 191 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 PHF19Q5T6S3 580 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 IZUMO3Q5VZ72 239 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 OTOP2Q7RTS6 562 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 LILRA3Q8N6C8 439 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 MYRIPQ8NFW9 859 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 PNISRQ8TF01 805 aaKnown RBP6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 POF1BQ8WVV4 589 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 CASKIN2Q8WXE0 1202 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 BRI3BPQ8WY22 251 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 NT5C1BQ96P26 610 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 SYT3Q9BQG1 590 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 MAF1Q9H063 256 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 ARFGAP3Q9NP61 516 aa6.7□□□□□ -1.34
HMGB1P47-201ENST00000511281 TEX51A0A1B0GUA7 166 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 NT5C1B-RDH14C9J2C7 533 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 BIN1O00499 593 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 TBX3O15119 743 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 KLHL18O94889 574 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 AMY1AP04745 511 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 HNRNPLP14866 589 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 MALP21145 153 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 TNFSF4P23510 183 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 ADCY8P40145 1251 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 HALP42357 657 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 KHDC1Q4VXA5 237 aaKnown RBP6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 ANO1Q5XXA6 986 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 GPR155Q7Z3F1 870 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 MYLK4Q86YV6 388 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 IGDCC3Q8IVU1 814 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 MSL3Q8N5Y2 521 aaKnown RBP6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 RNF152Q8N8N0 203 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 MZB1Q8WU39 189 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 LPPQ93052 612 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 SUCLG2Q96I99 432 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 PDCD2LQ9BRP1 358 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 KIAA1586Q9HCI6 787 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 SIRT5Q9NXA8 310 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 RGS17Q9UGC6 210 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 MAGEL2Q9UJ55 1249 aa6.69□□□□□ -1.34
HMGB1P47-201ENST00000511281 MYOCOSA0A1B0GUC4 107 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 A0A1W2PPL8 197 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 F5H423 210 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 H3BUI4 141 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 PIP5K1CO60331 668 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 PRAMEF4O60810 478 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 SEMA7AO75326 666 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 TSHRP16473 764 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 ZNF28P17035 718 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 EN2P19622 333 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms