RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 MAPK8IP1Q9UQF2 711 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 INPP5FQ9Y2H2 1132 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 PCDHB13Q9Y5F0 798 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 UBE4BO95155 1302 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-227ENST00000510951 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-227ENST00000510951 LCHNA4D1U4 455 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 TBKBP1A7MCY6 615 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 ANKRD63C9JTQ0 380 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 ABLIM1O14639 778 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 TOM1L1O75674 476 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 MBD3O95983 291 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 PIGRP01833 764 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 SKIP12755 728 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 ITGA4P13612 1032 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 SCP2P22307 547 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 PROZP22891 400 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 AKAP5P24588 427 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 HOXD13P35453 343 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 MLH1P40692 756 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 FAM189BP81408 668 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 KCNB1Q14721 858 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 SEZ6Q53EL9 994 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 CLLU1OSQ5K130 101 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 APBB1IPQ7Z5R6 666 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-227ENST00000510951 ZNF598Q86UK7 904 aaKnown RBP11.39□□□□□ -0.59
NR1I3-227ENST00000510951 TMEM192Q8IY95 271 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 THNSL1Q8IYQ7 743 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 ABI1Q8IZP0 508 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 PHOSPHO2Q8TCD6 241 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 HELQQ8TDG4 1101 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 NOC3LQ8WTT2 800 aaKnown RBP11.39□□□□□ -0.59
NR1I3-227ENST00000510951 KCNN1Q92952 543 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 GSDMAQ96QA5 445 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 TRAIPQ9BWF2 469 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 PBX4Q9BYU1 374 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 HAPLN2Q9GZV7 340 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 PTPRHQ9HD43 1115 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 RNF19AQ9NV58 838 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 RMND1Q9NWS8 449 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 KLK14Q9P0G3 267 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 HCSTQ9UBK5 93 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 PARP2Q9UGN5 583 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 MAN1B1Q9UKM7 699 aa11.39□□□□□ -0.59
NR1I3-227ENST00000510951 YBX2Q9Y2T7 364 aaKnown RBP11.39□□□□□ -0.59
NR1I3-227ENST00000510951 PLXNA4Q9HCM2 1894 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 SOX1O00570 391 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-227ENST00000510951 CLDN3O15551 220 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 DGKIO75912 1065 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 RECQL4O94761 1208 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 CA3P07451 260 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 MCF2P10911 925 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 DNAJB2P25686 324 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 MCL1Q07820 350 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 PSMD2Q13200 908 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 ZBTB41Q5SVQ8 909 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 AGMOQ6ZNB7 445 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 ELOA2Q8IYF1 753 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-227ENST00000510951 HACE1Q8IYU2 909 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 CRIPAKQ8N1N5 446 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 POMGNT1Q8WZA1 660 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 PGBD4Q96DM1 585 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 MSTO1Q9BUK6 570 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 NKX2-4Q9H2Z4 354 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 ELAC1Q9H777 363 aaKnown RBP11.38□□□□□ -0.59
NR1I3-227ENST00000510951 TMEM206Q9H813 350 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 RSAD1Q9HA92 442 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 SNTG2Q9NY99 539 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 ATG2AQ2TAZ0 1938 aa11.38□□□□□ -0.59
NR1I3-227ENST00000510951 TULP1O00294 542 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-227ENST00000510951 CLIC2O15247 247 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 HOXA2O43364 376 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 ZNF623O75123 536 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 ARHGEF15O94989 841 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 EOMESO95936 686 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 ADSSP30520 456 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 TNFSF9P41273 254 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 HTRA4P83105 476 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-227ENST00000510951 BTG3Q14201 252 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-227ENST00000510951 RAB30Q15771 203 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 KNOP1Q1ED39 458 aaKnown RBP11.37□□□□□ -0.59
NR1I3-227ENST00000510951 BMT2Q1RMZ1 405 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 LRIT3Q3SXY7 679 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 ZNF658Q5TYW1 1059 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-227ENST00000510951 ARMCX5Q6P1M9 558 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 GLB1LQ6UWU2 654 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 FAM43BQ6ZT52 329 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-227ENST00000510951 MRPL10Q7Z7H8 261 aaKnown RBP11.37□□□□□ -0.59
NR1I3-227ENST00000510951 SPATA20Q8TB22 786 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 ZNF507Q8TCN5 953 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 SAAL1Q96ER3 474 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 LRCH3Q96II8 777 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 ZFP42Q96MM3 310 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 GAD1Q99259 594 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 CBWD1Q9BRT8 395 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 CCDC94Q9BW85 323 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-227ENST00000510951 GBP3Q9H0R5 595 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 PCIF1Q9H4Z3 704 aa11.37□□□□□ -0.59
NR1I3-227ENST00000510951 RC3H2Q9HBD1 1191 aaKnown RBP11.37□□□□□ -0.59
NR1I3-227ENST00000510951 MSRAQ9UJ68 235 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms