RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 CSRNP2Q9H175 543 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 ABI2Q9NYB9 513 aaPredicted RBP13.47□□□□□ -0.25
LIN54-210ENST00000510877 AGAP1Q9UPQ3 857 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 TAF6LQ9Y6J9 622 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 XPAP23025 273 aaPredicted RBP13.47□□□□□ -0.25
LIN54-210ENST00000510877 RPA1P27694 616 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 NAMPTP43490 491 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 LRMPQ12912 555 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 SNX17Q15036 470 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.47□□□□□ -0.25
LIN54-210ENST00000510877 FAM105AQ9NUU6 356 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 CLIC2O15247 247 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 PLD1Q13393 1074 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 SCARA5Q6ZMJ2 495 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 SH3RF1Q7Z6J0 888 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 STKLD1Q8NE28 680 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 SLITRK1Q96PX8 696 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 MYCBPQ99417 103 aaPredicted RBP13.47□□□□□ -0.25
LIN54-210ENST00000510877 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.47□□□□□ -0.25
LIN54-210ENST00000510877 FAM217BQ9NTX9 383 aaPredicted RBP13.47□□□□□ -0.25
LIN54-210ENST00000510877 TMEM161AQ9NX61 479 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 RBAKQ9NYW8 714 aaPredicted RBP13.47□□□□□ -0.25
LIN54-210ENST00000510877 STIM2Q9P246 746 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.47□□□□□ -0.25
LIN54-210ENST00000510877 SNX9Q9Y5X1 595 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 IGSF9BQ9UPX0 1349 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 A8MXQ7 604 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 TUBB4AP04350 444 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 CYBBP04839 570 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 FGRP09769 529 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 LMAN1P49257 510 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 GLUD2P49448 558 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 FAM193AP78312 1265 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 MRPS5P82675 430 aaKnown RBP13.46□□□□□ -0.25
LIN54-210ENST00000510877 TMEM63BQ5T3F8 832 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 CASP10Q92851 521 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 COL20A1Q9P218 1284 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 SH3BP1Q9Y3L3 701 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 WNK3Q9BYP7 1800 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 H3BQ06 376 aaPredicted RBP13.46□□□□□ -0.25
LIN54-210ENST00000510877 RB1P06400 928 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 RBP5P82980 135 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 PCBP1Q15365 356 aaKnown RBP eCLIP13.46□□□□□ -0.254e-6■■■□□ 14.8
LIN54-210ENST00000510877 DUOXA2Q1HG44 320 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 SV2CQ496J9 727 aa13.46□□□□□ -0.25
LIN54-210ENST00000510877 ALG13Q9NP73 1137 aaKnown RBP13.46□□□□□ -0.25
LIN54-210ENST00000510877 ARMCX3Q9UH62 379 aaPredicted RBP13.46□□□□□ -0.25
LIN54-210ENST00000510877 ARIH2O95376 493 aa13.46□□□□□ -0.26
LIN54-210ENST00000510877 CST5P28325 142 aaPredicted RBP13.46□□□□□ -0.26
LIN54-210ENST00000510877 KRT9P35527 623 aa13.46□□□□□ -0.26
LIN54-210ENST00000510877 IFNAR2P48551 515 aa13.46□□□□□ -0.26
LIN54-210ENST00000510877 SKIDA1Q1XH10 827 aa13.46□□□□□ -0.26
LIN54-210ENST00000510877 Q4G0T1 1027 aa13.46□□□□□ -0.26
LIN54-210ENST00000510877 C4orf50Q6ZRC1 276 aa13.46□□□□□ -0.26
LIN54-210ENST00000510877 HOMEZQ8IX15 550 aa13.46□□□□□ -0.26
LIN54-210ENST00000510877 C17orf75Q9HAS0 396 aa13.46□□□□□ -0.26
LIN54-210ENST00000510877 CCDC183Q5T5S1 534 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 KSR1Q8IVT5 923 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 LPPQ93052 612 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 TNIP3Q96KP6 325 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 NSUN3Q9H649 340 aaKnown RBP13.45□□□□□ -0.26
LIN54-210ENST00000510877 TAF1LQ8IZX4 1826 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 DAPK3O43293 454 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 N4BP1O75113 896 aaKnown RBP13.45□□□□□ -0.26
LIN54-210ENST00000510877 TAPT1Q6NXT6 567 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 OTOP3Q7RTS5 596 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 SFR1Q86XK3 245 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 CSGALNACT2Q8N6G5 542 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 CLIC6Q96NY7 704 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 SNTG2Q9NY99 539 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 VGLL3A8MV65 326 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 ZSCAN12O43309 604 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 CYP3A4P08684 503 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 GBP1P32455 592 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 MLH1P40692 756 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 TAF6P49848 677 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 RPL10AP62906 217 aaKnown RBP13.45□□□□□ -0.26
LIN54-210ENST00000510877 SPAG1Q07617 926 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 ADAM9Q13443 819 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 CCDC26Q8TAB7 109 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 POF1BQ8WVV4 589 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 NOC2LQ9Y3T9 749 aaKnown RBP13.45□□□□□ -0.26
LIN54-210ENST00000510877 NR2E1Q9Y466 385 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 ZNF197O14709 1029 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 SEC24BO95487 1268 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 DARSP14868 501 aaKnown RBP13.45□□□□□ -0.26
LIN54-210ENST00000510877 YWHAHQ04917 246 aaPredicted RBP13.45□□□□□ -0.26
LIN54-210ENST00000510877 TMC5Q6UXY8 1006 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 ATXN3LQ9H3M9 355 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 BRD9Q9H8M2 597 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 TLR9Q9NR96 1032 aa13.45□□□□□ -0.26
LIN54-210ENST00000510877 IRX5P78411 483 aaPredicted RBP13.44□□□□□ -0.26
LIN54-210ENST00000510877 MRPS9P82933 396 aaKnown RBP13.44□□□□□ -0.26
LIN54-210ENST00000510877 Q7L0L9 218 aa13.44□□□□□ -0.26
LIN54-210ENST00000510877 GET4Q7L5D6 327 aaPredicted RBP13.44□□□□□ -0.26
LIN54-210ENST00000510877 TADA2BQ86TJ2 420 aa13.44□□□□□ -0.26
LIN54-210ENST00000510877 PPM1KQ8N3J5 372 aa13.44□□□□□ -0.26
LIN54-210ENST00000510877 DAGLBQ8NCG7 672 aa13.44□□□□□ -0.26
LIN54-210ENST00000510877 GDPD5Q8WTR4 605 aa13.44□□□□□ -0.26
LIN54-210ENST00000510877 HEXIM2Q96MH2 286 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms