RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 GDAP1L1Q96MZ0 367 aa17.39■□□□□ 0.37
SQSTM1-213ENST00000510187 SMARCAL1Q9NZC9 954 aa17.39■□□□□ 0.37
SQSTM1-213ENST00000510187 EHD2Q9NZN4 543 aa17.39■□□□□ 0.37
SQSTM1-213ENST00000510187 IGKV6D-21A0A0A0MT36 114 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 A6NNZ2 444 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 AKAP3O75969 853 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 FTCDO95954 541 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 JAM2P57087 298 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 SLC7A5Q01650 507 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 PTK2Q05397 1052 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 TUBB8Q3ZCM7 444 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 ZNF571Q7Z3V5 609 aaPredicted RBP17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 FMNL3Q8IVF7 1028 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 EMID1Q96A84 441 aaPredicted RBP17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 RUFY1Q96T51 708 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 MKNK1Q9BUB5 465 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 WBP1LQ9NX94 342 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 SEL1LQ9UBV2 794 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 ADCY6O43306 1168 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 ZNF862O60290 1169 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 PPFIA4O75335 1185 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 SLC9A1P19634 815 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 ARID5AQ03989 594 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 RPS6KA1Q15418 735 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 FAM160B1Q5W0V3 765 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 SRLQ86TD4 932 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 USP38Q8NB14 1042 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 OR6J1Q8NGC5 347 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 PPTC7Q8NI37 304 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 RAET1EQ8TD07 263 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 RIN2Q8WYP3 895 aaPredicted RBP17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 SLC35C1Q96A29 364 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 MS4A14Q96JA4 679 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 RUSC1Q9BVN2 902 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 PACSIN1Q9BY11 444 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 AZI2Q9H6S1 392 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 SIX2Q9NPC8 291 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 TMEM59LQ9UK28 342 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 MAFBQ9Y5Q3 323 aaPredicted RBP17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 IGSF9BQ9UPX0 1349 aa17.38■□□□□ 0.37
SQSTM1-213ENST00000510187 HEXIM1O94992 359 aaKnown RBP17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 GCNT3O95395 438 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 ACTN1P12814 892 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 ELNP15502 786 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 FERP16591 822 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 STAT5BP51692 787 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 PRKCEQ02156 737 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 DNAJC5GQ8N7S2 189 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 WHAMMQ8TF30 809 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 AFG1LQ8WV93 481 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 LMBR1Q8WVP7 490 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 BORCS6Q96GS4 357 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 CALR3Q96L12 384 aaKnown RBP17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 CCDC43Q96MW1 224 aaKnown RBP17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 PCYT2Q99447 389 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 KCND2Q9NZV8 630 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 NAGPAQ9UK23 515 aa17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 DBR1Q9UK59 544 aaKnown RBP17.37■□□□□ 0.37
SQSTM1-213ENST00000510187 CEP350Q5VT06 3117 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 ARHGEF35A5YM69 484 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 TMEM150BA6NC51 233 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 ADCY3O60266 1144 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 FAM13AO94988 1023 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 KIF4AO95239 1232 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 CYBAP13498 195 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 NPEPPSP55786 919 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 DCAF17Q5H9S7 520 aaPredicted RBP17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 RINT1Q6NUQ1 792 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 ALKBH5Q6P6C2 394 aaKnown RBP17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 STXBP4Q6ZWJ1 553 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 OTUD6AQ7L8S5 288 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 LRRC57Q8N9N7 239 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 TRPV1Q8NER1 839 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 ACTRT1Q8TDG2 376 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 GLG1Q92896 1179 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 GCNT4Q9P109 453 aa17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 GNEQ9Y223 722 aaKnown RBP17.36■□□□□ 0.37
SQSTM1-213ENST00000510187 RSPH10B2B2RC85 870 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 DYNC1LI2O43237 492 aaPredicted RBP17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 RSPH10BP0C881 870 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 AKR1A1P14550 325 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 PSMC2P35998 433 aaKnown RBP17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 RARRES1P49788 294 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 IRX5P78411 483 aaPredicted RBP17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 TRIM32Q13049 653 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 PLA2G4FQ68DD2 849 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 ANO5Q75V66 913 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 CD302Q8IX05 232 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 TSEN2Q8NCE0 465 aaKnown RBP17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 C1orf131Q8NDD1 294 aaKnown RBP17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 LENG1Q96BZ8 264 aaPredicted RBP17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 SH2D3AQ9BRG2 576 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 ANKEF1Q9NU02 776 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 RRP15Q9Y3B9 282 aaKnown RBP17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 CASP8AP2Q9UKL3 1982 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 TGFB1I1O43294 461 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 LGR5O75473 907 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 STBD1O95210 358 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 GLI1P08151 1106 aa17.35■□□□□ 0.37
SQSTM1-213ENST00000510187 ATP4AP20648 1035 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms