RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 IGFLR1Q9H665 355 aa14.93□□□□□ -0.02
SNF8-206ENST00000509989 TMEM134Q9H6X4 195 aa14.93□□□□□ -0.02
SNF8-206ENST00000509989 PARP2Q9UGN5 583 aa14.93□□□□□ -0.02
SNF8-206ENST00000509989 RCOR1Q9UKL0 485 aa14.93□□□□□ -0.02
SNF8-206ENST00000509989 GDAQ9Y2T3 454 aa14.93□□□□□ -0.02
SNF8-206ENST00000509989 RWDD3Q9Y3V2 267 aa14.93□□□□□ -0.02
SNF8-206ENST00000509989 PCDHB12Q9Y5F1 795 aa14.93□□□□□ -0.02
SNF8-206ENST00000509989 VWA8A3KMH1 1905 aa14.93□□□□□ -0.02
SNF8-206ENST00000509989 HIDE1A8MVS5 230 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 PTGESO14684 152 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 FSCN2O14926 492 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 N4BP3O15049 544 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 PER2O15055 1255 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 CUTAO60888 179 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 RECQL4O94761 1208 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 LTBRP36941 435 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 EFNA5P52803 228 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 OSTNP61366 133 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 PCBP1Q15365 356 aaKnown RBP eCLIP14.92□□□□□ -0.02
SNF8-206ENST00000509989 TMEM132AQ24JP5 1023 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 TAS1R1Q7RTX1 841 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 RBM23Q86U06 439 aaKnown RBP14.92□□□□□ -0.02
SNF8-206ENST00000509989 SFR1Q86XK3 245 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 MYCT1Q8N699 235 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 FEZF2Q8TBJ5 459 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 SPIRE2Q8WWL2 714 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 DDX12PQ92771 950 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 HPS3Q969F9 1004 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 TRIM6Q9C030 488 aaPredicted RBP14.92□□□□□ -0.02
SNF8-206ENST00000509989 NSUN3Q9H649 340 aaKnown RBP14.92□□□□□ -0.02
SNF8-206ENST00000509989 GDPD2Q9HCC8 539 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 MARCH5Q9NX47 278 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 TBC1D7Q9P0N9 293 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 CCDC39Q9UFE4 941 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 PLXNA3P51805 1871 aa14.92□□□□□ -0.02
SNF8-206ENST00000509989 INPPL1O15357 1258 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 FAM13AO94988 1023 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 KRT18P05783 430 aaKnown RBP14.91□□□□□ -0.02
SNF8-206ENST00000509989 HARSP12081 509 aaKnown RBP14.91□□□□□ -0.02
SNF8-206ENST00000509989 PROZP22891 400 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 STAT6P42226 847 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 RNASELQ05823 741 aaKnown RBP14.91□□□□□ -0.02
SNF8-206ENST00000509989 NCBP1Q09161 790 aaKnown RBP14.91□□□□□ -0.02
SNF8-206ENST00000509989 KCNA1Q09470 495 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 NAB2Q15742 525 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 GLRA4Q5JXX5 417 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 ZBTB41Q5SVQ8 909 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 PLPP4Q5VZY2 271 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 SLC39A4Q6P5W5 647 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 HAUS6Q7Z4H7 955 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 COLGALT2Q8IYK4 626 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 KCTD17Q8N5Z5 321 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 GLIS3Q8NEA6 775 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 VN1R2Q8NFZ6 395 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 LEO1Q8WVC0 666 aaPredicted RBP14.91□□□□□ -0.02
SNF8-206ENST00000509989 MRPS27Q92552 414 aaKnown RBP14.91□□□□□ -0.02
SNF8-206ENST00000509989 DHX58Q96C10 678 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 TIPINQ9BVW5 301 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 MRPL9Q9BYD2 267 aaKnown RBP14.91□□□□□ -0.02
SNF8-206ENST00000509989 LMAN2LQ9H0V9 348 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 RNF216Q9NWF9 866 aaPredicted RBP14.91□□□□□ -0.02
SNF8-206ENST00000509989 SPG21Q9NZD8 308 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 KCND2Q9NZV8 630 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 THEGQ9P2T0 379 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 STK17AQ9UEE5 414 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 ODF2LQ9ULJ1 636 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 TNFSF13BQ9Y275 285 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 PRG3Q9Y2Y8 225 aaPredicted RBP14.91□□□□□ -0.02
SNF8-206ENST00000509989 VCANP13611 3396 aa14.91□□□□□ -0.02
SNF8-206ENST00000509989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.9□□□□□ -0.02
SNF8-206ENST00000509989 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.9□□□□□ -0.02
SNF8-206ENST00000509989 ANKRD63C9JTQ0 380 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 NRP1O14786 923 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 ME1P48163 572 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 NRIP1P48552 1158 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 CASP5P51878 434 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 PLCB3Q01970 1234 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 DSC1Q08554 894 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 PTPROQ16827 1216 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 GRAMD1CQ8IYS0 662 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 CNNM3Q8NE01 707 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 IGSF21Q96ID5 467 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 B3GALT6Q96L58 329 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 NECAB3Q96P71 396 aaPredicted RBP14.9□□□□□ -0.02
SNF8-206ENST00000509989 TLR9Q9NR96 1032 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 AAASQ9NRG9 546 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 GIT1Q9Y2X7 761 aa14.9□□□□□ -0.02
SNF8-206ENST00000509989 C5orf42Q9H799 3197 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 H3BQ06 376 aaPredicted RBP14.89□□□□□ -0.03
SNF8-206ENST00000509989 K7ENM7 598 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 TRAK2O60296 914 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 TBX10O75333 385 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 GLP2RO95838 553 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 TNFSF9P41273 254 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 SOX4Q06945 474 aaPredicted RBP14.89□□□□□ -0.03
SNF8-206ENST00000509989 CLUL1Q15846 466 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 ZNF568Q3ZCX4 644 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 TIGD5Q53EQ6 642 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 RESP18Q5W5W9 173 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 CCDC73Q6ZRK6 1079 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms