RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 TTC30AQ86WT1 665 aa5.51□□□□□ -1.53
PHF3-210ENST00000509876 NDUFAF2Q8N183 169 aa5.51□□□□□ -1.53
PHF3-210ENST00000509876 GPR161Q8N6U8 529 aaKnown RBP5.51□□□□□ -1.53
PHF3-210ENST00000509876 TMEM35BQ8NCS4 154 aa5.51□□□□□ -1.53
PHF3-210ENST00000509876 EIF3CQ99613 913 aaKnown RBP5.51□□□□□ -1.53
PHF3-210ENST00000509876 ARID3AQ99856 593 aa5.51□□□□□ -1.53
PHF3-210ENST00000509876 FDXACB1Q9BRP7 624 aaPredicted RBP5.51□□□□□ -1.53
PHF3-210ENST00000509876 TRIM9Q9C026 710 aa5.51□□□□□ -1.53
PHF3-210ENST00000509876 PORCNQ9H237 461 aa5.51□□□□□ -1.53
PHF3-210ENST00000509876 HIPK3Q9H422 1215 aa5.51□□□□□ -1.53
PHF3-210ENST00000509876 FAM50BQ9Y247 325 aa5.51□□□□□ -1.53
PHF3-210ENST00000509876 SLC4A7Q9Y6M7 1214 aa5.51□□□□□ -1.53
PHF3-210ENST00000509876 COL2A1P02458 1487 aaPredicted RBP5.51□□□□□ -1.53
PHF3-210ENST00000509876 PFDN6O15212 129 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 PRPSAP2O60256 369 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 GFPT2O94808 682 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 THP07101 528 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 MCF2P10911 925 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 ACOT2P49753 483 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 SARNPP82979 210 aaKnown RBP5.5□□□□□ -1.53
PHF3-210ENST00000509876 SHC4Q6S5L8 630 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 DAAM2Q86T65 1068 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 ARHGAP18Q8N392 663 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 RSAD2Q8WXG1 361 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 PPP1R9BQ96SB3 815 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 AGXT2Q9BYV1 514 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 SNX9Q9Y5X1 595 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 MYO1FO00160 1098 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 ARHGAP6O43182 974 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 RPS6KA1Q15418 735 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 KCNA10Q16322 511 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 MTHFD1LQ6UB35 978 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 GPIHBP1Q8IV16 184 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 USP38Q8NB14 1042 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 ZNF296Q8WUU4 475 aaPredicted RBP5.5□□□□□ -1.53
PHF3-210ENST00000509876 CPB2Q96IY4 423 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 SAGE1Q9NXZ1 904 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 DPP3Q9NY33 737 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 SEPT10Q9P0V9 454 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 STAP1Q9ULZ2 295 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 FAM86B1E9PN63 330 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 MED24O75448 989 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 FAM86B2P0C5J1 330 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 SELPP16109 830 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 TUBB4BP68371 445 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 NBPF20Q3BBV1 942 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 CYP4A22Q5TCH4 519 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 SLC27A1Q6PCB7 646 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 DNAJC12Q9UKB3 198 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 RWDD3Q9Y3V2 267 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 TJP1Q07157 1748 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 GJB1P08034 283 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 ZNF18P17022 549 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 PRCPP42785 496 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 RECQLP46063 649 aaPredicted RBP5.5□□□□□ -1.53
PHF3-210ENST00000509876 DPCR1Q3MIW9 517 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 RFX6Q8HWS3 928 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 FIBCD1Q8N539 461 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 COPS5Q92905 334 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 RUSC1Q9BVN2 902 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 RBPJLQ9UBG7 517 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 CDY2AQ9Y6F7 541 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 C2CD2LO14523 706 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 OGTO15294 1046 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 SERPING1P05155 500 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 MYBP10242 640 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 MAPTP10636 758 aaKnown RBP5.5□□□□□ -1.53
PHF3-210ENST00000509876 GUCY2CP25092 1073 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 MGAT5BQ3V5L5 792 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 ZNF280DQ6N043 979 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 DLK2Q6UY11 383 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 TMC7Q7Z402 723 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 GRK7Q8WTQ7 553 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 CALR3Q96L12 384 aaKnown RBP5.5□□□□□ -1.53
PHF3-210ENST00000509876 UROC1Q96N76 676 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 GOLPH3LQ9H4A5 285 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 TMEM63CQ9P1W3 806 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 MYMKA6NI61 221 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 FGBP02675 491 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 PRR29P0C7W0 189 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 SNHG28P0DPA3 235 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 IGFBP4P22692 258 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 GNA15P30679 374 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 TUBB2AQ13885 445 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 NTRK3Q16288 839 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 WDR72Q3MJ13 1102 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 FMR1NBQ8N0W7 255 aaPredicted RBP5.5□□□□□ -1.53
PHF3-210ENST00000509876 GPT2Q8TD30 523 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 DYDC1Q8WWB3 177 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 CAPZA3Q96KX2 299 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 TUBB2BQ9BVA1 445 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 KLK14Q9P0G3 267 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 FEZ2Q9UHY8 353 aaPredicted RBP5.5□□□□□ -1.53
PHF3-210ENST00000509876 DNAI1Q9UI46 699 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 HPCAL4Q9UM19 191 aa5.5□□□□□ -1.53
PHF3-210ENST00000509876 FARP1Q9Y4F1 1045 aaPredicted RBP5.5□□□□□ -1.53
PHF3-210ENST00000509876 NUP98P52948 1817 aa5.49□□□□□ -1.53
PHF3-210ENST00000509876 IGKV6D-41A0A0C4DH26 115 aa5.49□□□□□ -1.53
PHF3-210ENST00000509876 GOLGA8CPA6NN73 597 aa5.49□□□□□ -1.53
PHF3-210ENST00000509876 CCL23P55773 120 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms