RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 RGS16O15492 202 aaPredicted RBP9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 DHX15O43143 795 aaKnown RBP9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 P4HBP07237 508 aaKnown RBP9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 MMEP08473 750 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 TRIM49P0CI25 452 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 TRIM49CP0CI26 452 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 ITIH2P19823 946 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 SLC8A1P32418 973 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 CDR2Q01850 454 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 MKRN3Q13064 507 aaKnown RBP9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 PTK6Q13882 451 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 STYK1Q6J9G0 422 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 CCDC137Q6PK04 289 aaKnown RBP9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 CPLX4Q7Z7G2 160 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 RPUSD2Q8IZ73 545 aaKnown RBP9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 C18orf8Q96DM3 657 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 HOOK2Q96ED9 719 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 LXNQ9BS40 222 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 NSRP1Q9H0G5 558 aaKnown RBP9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 GOPCQ9HD26 462 aa9.92□□□□□ -0.82
PDGFRA-208ENST00000509490 SFI1A8K8P3 1242 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 GRIN3BO60391 1043 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 CTNND1O60716 968 aaKnown RBP9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 ATP5DP30049 168 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 HOXA13P31271 388 aaPredicted RBP9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 SLC1A1P43005 524 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 CYP2J2P51589 502 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 SLC18A1P54219 525 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 FMO1Q01740 532 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 MAP3K10Q02779 954 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 RRP1BQ14684 758 aaKnown RBP9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 USH1GQ495M9 461 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 FKBP1CQ5VVH2 108 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 MIGA2Q7L4E1 593 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 FAM228AQ86W67 206 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 GBP7Q8N8V2 638 aaPredicted RBP9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 CCHCR1Q8TD31 782 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 JPH2Q9BR39 696 aaPredicted RBP9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 ZNF577Q9BSK1 485 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 PLVAPQ9BX97 442 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 MOV10L1Q9BXT6 1211 aaKnown RBP9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 AAASQ9NRG9 546 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 CTTNBP2NLQ9P2B4 639 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 SNX24Q9Y343 169 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 UBIAD1Q9Y5Z9 338 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 NFASCO94856 1347 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 SORBS3O60504 671 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 GH2P01242 217 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 MYBL1P10243 752 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 PYGMP11217 842 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 ABCB4P21439 1286 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 IVDP26440 423 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 PDE6CP51160 858 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 PLTPP55058 493 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 RWDD2BP57060 319 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 SKIDA1Q1XH10 827 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 PADI6Q6TGC4 694 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 CEP128Q6ZU80 1094 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 NOP9Q86U38 636 aaKnown RBP9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 ZNF677Q86XU0 584 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 PLEKHO2Q8TD55 490 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 HELQQ8TDG4 1101 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 KREMEN1Q96MU8 473 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 TMEM117Q9H0C3 514 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 IKZF4Q9H2S9 585 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 SEMA4AQ9H3S1 761 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 UBE2TQ9NPD8 197 aaPredicted RBP9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 HOMER3Q9NSC5 361 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 EURLQ9NYK6 297 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 SIP14410 1827 aa9.91□□□□□ -0.82
PDGFRA-208ENST00000509490 PHF20L1A8MW92 1017 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 SNX3O60493 162 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 GJB6O95452 261 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 RARAP10276 462 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 SCP2P22307 547 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 SKIV2L2P42285 1042 aaKnown RBP9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 MFAP3P55082 362 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 CENPCQ03188 943 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 CCDC15Q0P6D6 951 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 ZNF268Q14587 947 aaPredicted RBP9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 DOK7Q18PE1 504 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 ACAD10Q6JQN1 1059 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 C4orf19Q8IY42 314 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 RDM1Q8NG50 284 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 MFSD14AQ96MC6 490 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 NTPCRQ9BSD7 190 aaKnown RBP9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 AZI2Q9H6S1 392 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 ANKEF1Q9NU02 776 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 INTS9Q9NV88 658 aaKnown RBP9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 HSPBP1Q9NZL4 362 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 FEM1BQ9UK73 627 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 IPO5O00410 1097 aaKnown RBP9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 RASGRF2O14827 1237 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 ABHD2P08910 425 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 ARP10275 920 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 ABCD1P33897 745 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 PTGER2P43116 358 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 MARCKSL1P49006 195 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 RARRES1P49788 294 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 DLG4P78352 724 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms